KEGG   Sugiyamaella lignohabitans: AWJ20_2527
Entry
AWJ20_2527        CDS       T05270                                 
Symbol
SWD2
Name
(RefSeq) Swd2p
  KO
K14962  COMPASS component SWD2
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AWJ20_2527 (SWD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slb03019]
    AWJ20_2527 (SWD2)
   03036 Chromosome and associated proteins [BR:slb03036]
    AWJ20_2527 (SWD2)
Messenger RNA biogenesis [BR:slb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     AWJ20_2527 (SWD2)
Chromosome and associated proteins [BR:slb03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     AWJ20_2527 (SWD2)
    COMPASS/SET1 complex (yeast)
     AWJ20_2527 (SWD2)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WDR55 EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_NOL10_N Beta-prop_NUP159_NUP214 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML PAC11 Beta-prop_WDR75_1st Beta-prop_SPT8 CFAP251_N DSE1_N NBCH_WD40 PROPPIN Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD_LRWD1 Ricin_B_lectin
Other DBs
NCBI-GeneID: 30034448
NCBI-ProteinID: XP_018737389
UniProt: A0A167F7I9
LinkDB
Position
B:complement(1636407..1637432)
AA seq 341 aa
MASSPSVSSALPFNLEVMASFRPSKTLRNHKEAQITSLDFDDSGLYCITTANETQDESIQ
LYDCKTGKHSKTIFSKKYGANLARFTHNSMNCVYASTKEDDTIRYLSLHDNHFIRYFKGH
KDRVTSLEVSPMSDTFISASLDHSVRLWDLRSPSCQSLLNVPGPILVTFDATGVVFIVGC
EQLNSIALYDVKNQERPFMSFEPNTPAGVRWCKIEVSNNGNYIMLVTDASTYIYDAYNGT
PQGRLAGLVPLNGRQASLSSQCAFSVNGKYIFGGSNDKKIHIWDTSQLSKSAPTLSPVIS
LDSNQEVAALLAFSPKTMLMATADKALTFWLPDRDLINLNK
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggctagctcgccgtcggtgtcgtcggcgctgccttttaacttggaggtgatggcctcg
ttccggccgtcgaaaactctgcgaaatcacaaagaagcccagatcacttcgttagacttt
gacgactcggggttatattgcatcacaacagccaacgagactcaggatgagtcgattcaa
ttatacgattgtaagacaggaaagcacagtaaaactattttcagtaaaaagtatggagcc
aacttggccaggttcactcacaactcgatgaactgtgtatatgcatccacgaaagaggac
gatactatcagatatctatcgctacatgataaccatttcatccggtatttcaagggccac
aaagatcgagtcacgtcgctagaggtgtctcctatgtcagatacgtttatttcggcaagt
ttagatcattcggtacggttatgggacctgaggtcgccctcatgccagagtttactgaac
gtaccaggccctattctcgtgacgttcgatgctacaggagttgtatttattgttggatgt
gaacagttgaattctattgcattatacgacgtgaaaaaccaggagcgaccgttcatgtcg
tttgaacccaacaccccagccggcgtccgatggtgtaagatcgaggtttctaataacgga
aactacatcatgttggtcaccgatgcgtctacttatatatacgatgcttataatggcaca
ccacaaggacgactggcgggattagtgcccctcaatggccgacaagcttccttatcgtca
caatgtgcgttttccgtgaacggtaaatacattttcggaggatctaacgacaaaaaaatc
catatctgggatacaagccagctgtcgaaatcagcacccaccctctcaccggttatctcg
ctagacagcaaccaggaagtagctgcgctcctagcgttcagccccaaaactatgctcatg
gccacagcagacaaagcactaaccttctggctccctgaccgagatctcatcaacctcaac
aaataa

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