Sugiyamaella lignohabitans: AWJ20_2540
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Entry
AWJ20_2540 CDS
T05270
Symbol
RPA190
Name
(RefSeq) DNA-directed RNA polymerase I core subunit RPA190
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWJ20_2540 (RPA190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_2540 (RPA190)
Enzymes [BR:
slb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWJ20_2540 (RPA190)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
AWJ20_2540 (RPA190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
BUD22
Nop14
Motif
Other DBs
NCBI-GeneID:
30034463
NCBI-ProteinID:
XP_018737400
UniProt:
A0A167F7U6
LinkDB
All DBs
Position
B:complement(1678948..1683672)
Genome browser
AA seq
1574 aa
AA seq
DB search
MYILLRSSCLYCHRFKLRYLETHLFESRLKLLQHGLVLESIEIENLRIGGGLEDDIEEGE
EDEAGLGYSTSSSSKTSAEIAQANDLIARRNKYVSKAISKAIAEGRTSKSGVQTSSVLEE
RKRVVSEFYKRILVRPKCDNCGMFSPKYRKDGFTKIFETALTTKQLSNNRVKGMMRQEMV
FESKENSANGTEEVVELSDIPIPKASGKDSSRYVLSTEVRNILRAVFNKEQDVCKVLFQM
KPDSTEKISADMFFIQFVVVPPTRFRLPSQLGDEIHANTQNDLLAKVLTTSLRIRDLNEQ
ISVMRSKKIGGEERKLVFNQLMNGFVTIQNDVNAFLDSTKNQNPTAGKLPLPGVKQALEK
KEGLFRKNMMGKRVNYAARSVISPDPNLETNEIGVPPVFAVKLTYPEPVTAYNFNELRQA
VINGPNVWPGATQIQNEDGSIISLHNMTTEQRAALGSQLLTPSTLPGASGVINKKVYRHI
RNQDVVLMNRQPTLHKASMMGHKVRVLPGEKTLRLHYANTGAYNADFDGDEMNMHFPQNE
NARAEALLLANTDSQYLTPTSGKPLRGLIQDHISAGVWLTNKDTFFTREQYQQLIYGSVR
PEDGHTTGPRILTVPPTIWKPVPLWTGKQVITTVLLNIKPLDRPGLNLVSKNKIKNEYWG
KDSEENKVLFQDGHLLSGILDKSQYGAADYGFVHSVHEIYGAHSAGMLLSVLGRLFTKYI
MTIGFTCGMDDLHLTSEGNKWRKDILDGAFDVGLKAAAEVTNLPEHTTTNDPELKKRLEE
ILRDDNKLGILDAITQSKVNAVTSSVVSKCIPEGTSKRFPQNNMQSMALSGAKGSNVNVS
QIMCMLGQQALEGRRVPVMVSGKTLPSFKPFETAARAGGYISGRFFSGIKPQEYYFHCMA
GREGLIDTAVKTSRSGYLQRCLIKQLEGVHTNYDNTVRDSDGTMIQFLYGGDAIDVIKES
HLKQFEFCAKNYESLLQKHQPRSSIENINTDEAISYAKKVRKYLKKHGDEEHHLQAPKYD
PVLAMYNPSKYLGSVSEKFQDDLEKFIENNQNLFPKKDKKGGSSTGITEKKFRSLMQLKY
MQSVVNPGEAVGIIASQSIGEPSTQMTLNTFHFAGHGAANVTLGIPRMREIIMTASASIK
TPQMTLPILDSISDDQADIFCRAVARIVLSQMIDNVVVTERTGVNAQGMDTRSYTVRMKF
YKREDYEAEYDISQHQLEDIVANKFLAALETYVLKEIRKQKKTSEAESIGKSVPVRTTSA
STAKLSSSEAADDGDDDDDSDDENVDEEDAKESQSKSKQAASYDGPDDEELEAMEKAQKS
SDEEDSDSDSDSDSDSDSDVDMKDDVDTPATLSSKAKERQQAVVGKHNTVRKFNFDDKNG
EWCEFELEYPAETKKLLMVNFVEHLCRTVVVREIPKIGRCIRPTNDKNGRVLVTEGVNFG
AMWEEDAFINVDGILSNDISAVLKTYGVEAARNTIVREINNVFETYAITVNLRHLDLIAD
MMTREGTYLPFNRQGVDSGTSPFMKMSFETTCQFLTKSVLDGGSDTLESPSARIVLGKIS
KVGTGSFDIFSPVY
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgtacattttattgagatcgtcgtgtctctactgtcatagatttaaacttcgttacctg
gaaacgcatttgtttgaaagtagattgaaattgttgcagcatggcttggttttagagagc
attgagattgaaaacctgagaattggtggtggtctcgaggatgatatcgaagaaggtgaa
gaagacgaagctggtttgggctactccacttcaagtagctctaagaccagtgctgagatt
gctcaggccaacgacctaattgctcgtagaaacaagtatgtatccaaggctatcagcaag
gctattgctgagggtagaacctcgaaatcaggtgttcaaacctcatctgttcttgaggag
cgtaagagagttgtcagtgagttttacaaacgtattctcgttagacccaaatgtgataac
tgtggtatgttttctccaaagtatagaaaggatggcttcaccaagatcttcgagaccgct
cttactactaaacaactttcaaacaaccgagtcaaaggtatgatgagacaagagatggtt
ttcgaatcaaaggagaactctgccaatggtacagaagaagttgttgagcttagtgacatt
ccaattcctaaggctagtggaaaggactcgagtagatatgttttgtctaccgaggtgaga
aatattttgagagcagtcttcaataaggagcaagacgtgtgcaaagtgctgtttcaaatg
aagcctgattcaacggagaagatctctgctgatatgtttttcattcagtttgtggttgtt
cctcccaccagattcagactcccatctcagttgggagatgaaatccacgccaatactcaa
aatgacttgttagcaaaggttctgactacttcgctgagaatccgtgatcttaacgaacaa
atttcggtcatgagaagcaaaaagattggtggtgaagaacgtaagcttgtgttcaaccag
ctcatgaacggctttgttaccattcaaaacgatgttaatgcattccttgacagtactaaa
aatcaaaatcccactgctggtaaactgccacttcctggtgtcaagcaagcattagaaaag
aaggagggtttgttcagaaaaaacatgatgggtaagcgtgtcaattatgccgcccgttca
gttatttctcctgatcccaatttggaaaccaatgaaattggtgttcctccagtgtttgct
gtcaagttgacttatccagagcctgtcactgcatacaacttcaacgaattacgccaagcc
gtcattaatggtcctaatgtctggcccggtgctacccaaattcaaaatgaagatgggtct
atcatttctctacataacatgactactgagcaacgtgctgctcttggtagtcaattgcta
actccttcaactcttccaggtgctagtggagttatcaacaaaaaggtataccgtcatatc
cgtaaccaggatgttgtgctaatgaatagacagcccactctccacaaggcttctatgatg
ggtcacaaggtacgtgtgctgccgggtgaaaagacattgcgtctccattatgccaacact
ggtgcttataacgccgatttcgatggtgatgaaatgaatatgcatttccctcaaaatgag
aatgctcgtgctgaagcgttactgcttgccaacactgactctcaatatcttactcctaca
tcaggtaagccacttcgtggtcttattcaagatcacattagtgctggtgtttggttgacg
aacaaggatacatttttcactcgtgagcaatatcagcaactcatttacggcagtgtgcgt
cctgaagatggtcatactactggtccaagaatcttgactgtgcctcctaccatttggaag
cctgttccattgtggactggtaaacaagtcattaccacagtgttgctgaatatcaagcct
cttgatcgtccaggtctcaatcttgtttctaagaataagatcaagaacgagtactggggc
aaggactcggaagagaacaaggtcctgttccaagacggtcatcttttgtctggtatttta
gacaagtctcaatatggtgcagctgactatggtttcgttcactctgttcacgaaatttac
ggtgctcactctgcaggtatgcttctcagtgttctgggtcgtcttttcactaaatatatc
atgacaattggtttcacatgtggtatggacgacttacatcttacttctgagggtaacaag
tggagaaaggacattttggatggtgcttttgacgttggtttgaaggccgctgctgaagtg
accaatcttcctgaacacacgaccaccaacgatccagaattgaagaaacgtttggaggaa
attcttcgtgacgataataagcttggtattttggatgctatcacccagtcaaaggtgaac
gctgttacgtctagcgtcgtttccaagtgtattcccgaaggtacatccaagcgtttccct
caaaataacatgcagtctatggctctttctggtgccaaaggttctaatgtcaacgtttct
caaattatgtgtatgcttggccagcaagcccttgagggtcgtagagtaccagtaatggtg
agtggtaagacattgccctctttcaagccctttgaaactgctgctagagctggtggttat
atctctggtcgtttcttctcaggtattaagcctcaagagtattacttccattgtatggct
ggtcgtgaaggtttgattgataccgccgtcaagacttctcgttccggttatcttcaaaga
tgcttgattaagcagttggaaggtgttcataccaattacgataacactgttcgtgatagt
gatggtaccatgatccagttcctttacggaggtgatgccattgacgttatcaaggagtct
cacttgaagcaattcgaattctgtgccaaaaactacgagtcgctgcttcaaaagcatcaa
cctagaagttccattgagaacatcaacactgatgaagccattagctatgctaagaaggtg
cgcaaatatctcaagaaacacggagatgaagagcaccacttgcaagcccctaaatatgat
cctgttctggcaatgtacaatccatccaagtacttgggtagtgtttcggagaagttccag
gatgatcttgagaagttcattgaaaacaatcaaaacttgtttcccaagaaggataaaaag
ggtggctccagcactggtattacagagaagaagttccgttctcttatgcaactcaagtat
atgcagtctgttgtcaaccctggtgaagcggtgggtattattgcatctcagtctattggt
gagccttctactcaaatgacccttaacaccttccactttgctggtcacggtgccgctaac
gtaacattgggtattcctcgtatgagagaaattatcatgactgcgtctgcctctatcaag
actcctcaaatgactttaccaatcttggacagcatcagcgatgaccaagctgacatcttc
tgcagagctgttgcaagaatcgtattgtcccagatgattgataatgtagtcgtcacagag
agaactggtgtaaacgctcagggcatggataccagatcgtacactgttcgcatgaagttt
tacaagcgagaggattatgaggcagagtacgatatttctcaacaccagcttgaggatatc
gttgctaacaaattcttggctgctcttgaaacttatgtcctcaaggagatcagaaagcag
aagaagacttcagaagccgagtctattggtaaatctgtgcctgtacgaacgacatcagct
agcaccgccaagttgtcttcttctgaagctgctgatgatggtgacgatgatgatgattct
gatgatgagaacgttgatgaggaggatgccaaagaatcacagtccaaatccaagcaagcc
gcttcgtatgatggacccgatgacgaagaattggaggctatggagaaagctcaaaagtca
tcagatgaagaagattctgactccgatagcgactctgactctgattccgactctgatgtg
gacatgaaggatgatgtagatactccagctaccttgtcaagtaaggctaaggaacgtcaa
caggcagttgttggtaagcacaacaccgtgcgcaagttcaactttgacgataagaatggt
gaatggtgtgaatttgagcttgagtatcctgctgaaaccaagaagttgctcatggttaac
tttgtcgaacatctgtgtcgtactgttgttgtcagagaaatccccaagattggtagatgt
attcgtcctactaatgacaagaatggtcgtgttctagttactgagggtgtgaactttggt
gccatgtgggaggaagatgcctttattaatgtcgatggtatcctttccaacgatatttcc
gcagttctgaaaacttatggtgttgaggctgctcgtaacaccattgtcagagaaattaac
aatgtgttcgaaacttatgccatcactgttaacttacgtcacttggatctcattgctgat
atgatgacaagagaaggtacttacttgccatttaacagacagggtgttgattctggaact
tcgccattcatgaagatgagtttcgaaaccacgtgtcaattcctgacgaaatcagttctt
gatggaggcagtgatactttagaatctcctagtgcccgtatagtcctcggtaagatctca
aaggtcggaacgggctcctttgacattttctctcctgtttattag
DBGET
integrated database retrieval system
