Sugiyamaella lignohabitans: AWJ20_2667
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Entry
AWJ20_2667 CDS
T05270
Symbol
RPB2
Name
(RefSeq) DNA-directed RNA polymerase II core subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03020
RNA polymerase
slb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWJ20_2667 (RPB2)
09124 Replication and repair
03420 Nucleotide excision repair
AWJ20_2667 (RPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_2667 (RPB2)
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_2667 (RPB2)
Enzymes [BR:
slb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWJ20_2667 (RPB2)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AWJ20_2667 (RPB2)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AWJ20_2667 (RPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
MRNIP
Motif
Other DBs
NCBI-GeneID:
30034603
NCBI-ProteinID:
XP_018737524
UniProt:
A0A161HML7
LinkDB
All DBs
Position
B:complement(2109200..2112631)
Genome browser
AA seq
1143 aa
AA seq
DB search
MTEADGSTHPMFPQEARLRNLTYSSPLYVDMRKRVLFSKDVGGAPGTRGADGGTGNNEIE
WYPDPNEPEEPISKVYIGKVPIMLRSKFCMLRGLREHEFYELNECPYDQGGYFVINGSEK
VLIAQERSAANVVQVFKKAANSPVTHVAEIRSALEKGSRLISSMQIKLFGKEKTIKAALP
YVKSDIPIVLVFRALGVVPDGDILEHICYDQNDWQMLEMLKPCIEEGFFVQDREVALDYI
GRRGSAMGINREKRIRYARDILQKELLPHITQQEGYESRKAFFLGYMVHRMLLVVLERRE
PDDRDHFGKKRLDLAGPLLANLFRMLFKKLTRDIYRYMQKCVETNKDFNLTLAVKSNTIT
NGLKYSLATGNWGDQKKAMSSRAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKIARPRQL
HNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGSPSQPIIYFLEEWGMEPLEDYVPHAS
PDAIRIFVNGVWIGVHRDPSHLVETMKALRRKGDISPEVSIIRDIREKEFRIFTDAGRVY
RPLFLVDNDEESPRKGELMLRKEHIYELLNAEEAPVDETDENAPEKFGWNSLVSNGIVEY
IDGEEEETVMIAMTPEDLEVSRQMQAGIEVAADDEDPDPARRVKQSYNPNAHTWTHCEIH
PSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNYSVRMDTMANILYYPQKPLA
TTRSMEYLKFRELPAGQNAIVAILCYSGYNQEDSMIMNQSSIDRGLFRSLFFRSYMDQER
RIGMSVVEEFEKPTRADTLRLKHGTYDKLDEDGLIAPGIRVSGEDIIIGKTAPIPPDTEE
LGQRTKYHTKRDASTPLRSTENGIVDQVLLTTNQEGLRFVKVRMRTTKVPQIGDKFASRH
GQKGTIGVTYRREDMPFTAEGIVPDLIINPHAIPSRMTVAHLIECLLSKVSSLSGLEGDA
TPFTDVTVEAISRLLREHGYHSRGFEVMYNGHTGRKLVAQVFFGPTYYQRLRHMVDDKIH
ARARGPVQILTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHVCG
VCGLMTVIANLKKVQFECRSCKNKTKIYQVHIPYAAKLLFQELMAMNIAPRLYTDSSGVS
VRV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagctgatggtagtacccatccaatgtttcctcaagaagcaagactacgaaat
ttaacctattcatcacctttgtatgtggatatgagaaagcgtgttctcttctcgaaggat
gttggtggtgcaccaggtactcgtggtgcagatggtggcactggaaacaatgagattgaa
tggtatccagatcctaatgaacccgaggaacccatttccaaagtttatatcggtaaagtg
cctatcatgcttcgatccaagttctgtatgcttcgtggtttgcgagaacatgaattctat
gagctcaatgaatgtccttatgatcaaggtggttactttgttattaatggttcagaaaag
gtgttgattgcccaagaaagaagtgctgccaatgttgttcaagtgtttaagaaggcagct
aattctccagtcacacacgtggctgaaatccgtagtgctctggagaagggctctcgtctt
atcagttccatgcaaatcaagctgttcggcaaggaaaagacaattaaggctgctttgcct
tatgtcaagagtgatatccctattgtcctggtattcagagcattaggagtcgttcctgat
ggtgatattcttgaacatatctgttacgatcaaaacgattggcagatgctcgagatgctt
aagccatgtatcgaagaaggattcttcgttcaagatagagaagtggctctcgattatatc
ggtagacgtggtagtgccatgggtattaacagagagaagcgtattagatatgctcgtgat
attcttcagaaggagttgttgcctcatattactcaacaagaaggttatgagtctagaaag
gcatttttcctgggttatatggttcatcgaatgcttttagtggtgctggagcgtcgtgaa
ccagatgaccgtgatcattttggtaaaaagcgtcttgatttggcaggtccacttcttgct
aatctgttccgtatgctattcaaaaagttaactcgtgatatttatcgatacatgcaaaag
tgcgtcgaaacaaacaaggatttcaatcttacactggctgtcaagtcaaatacaatcaca
aatggtctcaaatactctctggctacgggtaactggggtgaccagaagaaggctatgtca
agtagagcaggtgtttctcaggtactcaacagatatacattctcatcgactctatcacat
ttgagaagaacaaatacccctatcggaagagatggtaaaatcgcccgtcctcgtcaatta
cacaatactcactggggtcttgtgtgtcccgccgaaacacctgaaggtcaggcgtgtggt
ttggtcaagaatttgtcactcatgtcgtgcatttcggttggtagtccatctcaacctatt
atttatttcttggaagaatggggtatggagcctctggaagactatgtgccacacgcatcg
ccagatgctatcagaatttttgtgaacggtgtttggattggcgttcatagagacccttcg
catctggtcgaaaccatgaaggcgttacgacgaaaaggtgacatttctcctgaagtcagc
attattagagacattcgtgagaaagagttccgtattttcacggacgctggtcgtgtttac
agaccactctttttggtcgacaacgatgaggagtcgccccgtaagggtgagttgatgctt
cgcaaggaacacatttatgagttgctcaacgctgaggaggctcctgttgatgagactgat
gagaatgctccagaaaagtttggctggaattcgctggtgtcaaatggaattgtagaatat
attgatggtgaggaggaggagacagtcatgattgccatgacgccagaggatttggaggtc
tcgcgacaaatgcaggccggtattgaagtggctgctgatgatgaagacccagatccagct
cgtagagtgaaacagtcatacaaccccaatgcacacacgtggacccactgtgagattcat
ccatccatgattctaggtatttgtgccagtattattcctttccccgatcataatcaatca
cctcgtaacacataccagtctgctatgggaaaacaggccatgggtgtgtttttgactaat
tactcggtccgtatggatactatggccaacatcttgtattatccacagaagccattggca
actacccggtcaatggaatacttgaagtttagagagttgccagccggacaaaacgctatt
gtagctattctttgttacagtggatacaaccaggaagattccatgattatgaaccaaagt
agtatcgaccgtggattattccgaagtttgtttttcagatcttacatggatcaggagcgt
agaattggtatgtctgttgttgaagagtttgaaaagcctactagggctgatactcttcga
ctcaagcatggtacatatgataagcttgatgaggatggacttatcgctcctggtattcgt
gtgtctggtgaagatattatcattggtaaaactgctcctattcctccagataccgaagaa
cttggccaacggaccaagtaccatactaagcgagatgcctctacaccgctgagaagtact
gagaatggtatcgtggatcaagttctactgaccacgaaccaagagggtctgaggtttgtc
aaggttagaatgagaaccaccaaggttcctcaaatcggtgataagtttgcatcgcgtcac
ggtcaaaaaggtactattggtgttacataccgtcgtgaagatatgccatttactgctgaa
ggtattgtgccagatctcattatcaacccacacgccattccatctcgtatgacagtcgcc
catttgattgaatgtttattgagtaaagtgtcatcactgtcgggtttggaaggtgatgct
acaccatttaccgacgttacagtagaggcaatttcccggttattgcgtgaacatggctac
cattcaagaggttttgaggtcatgtacaatggtcatactggacgtaagcttgttgcccaa
gtgtttttcggtcctacttattatcaaagattgagacacatggtcgacgacaagatccat
gccagagcccgtggtcccgtacagattcttactagacaaccagtcgaaggtagatcgcgt
gatggtggtttgcgtttcggagagatggaacgtgattgtatgattgctcacggagctgct
gcgttcttgaaggagcgtcttatggaggcttcagatgcgttccgagtccatgtgtgtggt
gtgtgtggtcttatgactgtcattgctaatttgaaaaaggtgcaatttgaatgtcgttca
tgtaagaacaagaccaaaatctaccaagttcacatcccatatgccgccaagctcttattc
caagaacttatggctatgaacattgcaccaagattatacactgacagttctggtgtatct
gtcagagtctaa
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