Sugiyamaella lignohabitans: AWJ20_271
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Entry
AWJ20_271 CDS
T05270
Symbol
DBP9
Name
(RefSeq) Dbp9p
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_271 (DBP9)
Enzymes [BR:
slb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWJ20_271 (DBP9)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
Pre-60S particles
Helicases
AWJ20_271 (DBP9)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CDC45
MSP1b
AAA_22
LSDAT_prok
Motif
Other DBs
NCBI-GeneID:
30034651
NCBI-ProteinID:
XP_018734515
UniProt:
A0A161HKA2
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Position
A:859190..860950
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AA seq
586 aa
AA seq
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MSSSNGEMAGKNGFESFNLDPRLQQALVQAGFSEPTLIQENAIPLALSEKKDIVARARTG
SGKTAAYLIPIIESLLQAAGSGNAGTGVISTLILVPSKELADQVVKMTTMLTTYCTKLIQ
VVNISQATSEQVQTSLLSENPAIVVATPARALAHIKRKSLDTKSLAYFVIDEADLILSYG
HEDDLNELAELLPKSMQTWLMSATLSDEIDAIKGKFCRNVAVLKLQDTVSSEQLLQYYVK
CNELDKFLLAYVIFKLKLVKGKTIVFVNDIDRCYRLKLFFEQFGIKSCVLNSELPVSSRL
HIVDEFNKNVYNLLIATDESNEKIEDDEDDKDDATANSNGNDQEKQTDSQPTENTQETQE
TQKKNNNNNKSKDYGVSRGVDFQNVACVLNFDLPTSTKSYTHRIGRTARASKTGMALSFV
VSKESWGKHKPSMLASAKRDEKVLNRIIKTQGKQDNELKPYSFDMKQVESFRYRMEDAFR
AVTKVAIREARVKEIRQELLASDKLKRHFEENPEDLANLRHDKELHPARVQGHLKRVPDY
LLPKTGQKPAAFTGHVPFNKTNNKHRVHKSKKSSKKRDPLKSFKRR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgaatggagagatggctggaaagaacggttttgagtcatttaatttggac
ccgcggttacagcaggcgctggtgcaagccgggtttagcgagcccactttgatccaggag
aatgccattccactggcgttgagcgagaagaaggatatcgttgccagggccaggacgggt
tctggtaagacagcagcttatttgattccgattattgagtcgctgttacaggcggctggg
tctggtaatgctggtacaggagttattagtactttgattttggtgccgagtaaagaattg
gcggatcaagttgttaaaatgacgactatgcttactacgtactgcaccaagttgatccag
gtggtgaatatttctcaagctaccagtgagcaagtacagacttcgcttttgtcggagaat
ccggcaattgtggtagctactccagctagggctctggctcatatcaagagaaagtccttg
gatacaaaatcattagcatactttgtgattgacgaggcagaccttattctgtcgtatggt
catgaagacgatttgaacgaattggctgaactgctgcctaaatctatgcaaacatggctc
atgagtgctacactcagcgacgagattgatgccattaaaggcaaattctgtcgtaatgtg
gcagttctcaagctacaagatacagtgtcatccgaacagctgctgcagtactacgtcaag
tgtaatgaactcgataagtttttattggcatatgttatttttaaactcaagctggttaag
ggaaagacgattgtgtttgtcaacgatatcgaccgttgttaccgactcaagctatttttt
gagcagttcggcatcaagagttgtgtactgaactcggaactgccagtgtcgtcccgtctt
catattgtggatgagttcaacaaaaacgtatataatttattaattgctactgacgagagc
aatgaaaaaatcgaagatgacgaagatgataaagacgatgccactgccaacagtaatgga
aatgaccaagaaaaacaaactgattcacaacccaccgaaaatacacaagaaacacaagaa
acacaaaagaaaaacaacaacaataacaagtcaaaagactatggagtcagtcgaggagtt
gatttccagaacgtagcatgtgtcctaaacttcgaccttcccaccagcactaaatcatat
acacaccgtattggacgtactgcacgagcatcgaagaccggaatggcattatcgtttgtc
gttagcaaagaatcatggggaaaacacaagccatccatgttagccagtgctaagagagat
gagaaagtgctgaaccgaattatcaagacccaaggcaagcaagataacgagctcaaacca
tattctttcgacatgaaacaagtcgagtcgttccgatacagaatggaagacgcattccgt
gcggtcaccaaagtggctattcgagaagcccgagtaaaagagatccgacaagaactgctt
gccagtgataaactgaaacgacatttcgaagagaaccccgaggacctggccaacctgcga
cacgacaaagaactgcatcccgcacgagtccagggccatctcaaacgcgtgcccgactac
cttctccccaaaaccggtcaaaagcccgctgccttcacgggccatgtgccattcaacaaa
accaacaacaaacacagagtccacaaatccaagaagtcctcgaaaaagagagaccctctc
aagagcttcaaaagacgctag
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