Sugiyamaella lignohabitans: AWJ20_2768
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Entry
AWJ20_2768 CDS
T05270
Symbol
RDH54
Name
(RefSeq) DNA-dependent ATPase RDH54
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AWJ20_2768 (RDH54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_2768 (RDH54)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
AWJ20_2768 (RDH54)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
ZGRF1-like_N
RecA-like_ORC2
Motif
Other DBs
NCBI-GeneID:
30034715
NCBI-ProteinID:
XP_018737623
UniProt:
A0A167FD72
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Position
B:complement(2409411..2412110)
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AA seq
899 aa
AA seq
DB search
MYRRRRIDANSLSTGAAAPFKPLQLNKTSHERLGDTECLESVLSKKFKIEHTPKRHQRQL
AALSQIKSLQDSEKKIELPDAPNSARKTFTILWRKYSTKKNKTWEGDGILLIDENNIAKL
RNESGKLIAQSKVSNGIKIDDVIRVGFFEVQIDSIKADDDEGDKTNATPCLSQPLPTVSP
SLKSSMALIGGSRMKSNMTPRFDPTAPGAIVLPRPRPEPLGKTIIDVVVDPLISSKLRPH
QVEGVKFLYQCVMGMNHYAGKGALLADEMGLGKTLLTIALLWTLLKQNPIRGEPPVLKRV
LIVCPVTLIANWQKEFRKWLGQDRIGVFVADSKARIRDFTGSKVYSVMIVGYEKVRTLVE
ELKSVKFDIIVCDEGHRLKNATNKSIQALVALNTEKKIILSGTPIQNDLGEFFVMIDFLN
PGILGTYGSFRKNFETPIMRSRQPGALKNDVTLGKQKSEELTQLTQKFILRRTASTLDRY
LPPKTESVIFCYPTDTQLQMYKQILDSSELKTYLGSNDTSDHLRAISLLKKICNSSSLIQ
HNAQGDAASVSASLIAKSANQLPLHSGKIRALLLFLKYIYNDTNEKVVIVSGFTQTLDMI
EVLLNYNSMSSLRLDGSTAQSKRQKIVDQFNQSDQSSSFAFLLSSRSGGVGLNLVGASRL
FLFDTDWNPSIDLQAMARIHRDGQKKPVFIYRLLLCGTIDEKIYQRQVTKQGLADRFMSV
DSDKEVTSAKDPVTFGDSNSSDTFSADDLRDLFVLHQDTPCNTHDILECGCLKSDASQDP
EYCEGSTDASICSNQIEHISNIVYEGSDSDDDLGGWMSAKAVAQEGIHIPRAMKKKDRLK
GLFDYRHIDVASDVSPIEDSILLKIISLSPNTVSFVFTKSTVVNENASQAVEEVEDPQH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgaagaagacggatagatgcaaactccttatcaacaggagcagctgctcctttt
aaacctctacaacttaataaaacatcgcacgaacgcttgggagatactgaatgcttggag
agtgtcctaagcaagaaattcaaaatagaacatacgccaaagaggcatcaaagacaattg
gcggcgctctctcagataaagtcattgcaagattcagagaagaaaatagaattaccagat
gctcccaactcggctagaaagacgttcacaattctatggcggaagtattccactaagaag
aataaaacttgggagggagatggcatcctgttaatagacgaaaataatattgctaagctt
agaaatgagtcgggcaaattaattgcacaatcaaaagtgagtaatggaatcaagattgat
gacgttattcgagtcgggttttttgaggttcagatagactcgattaaagctgatgatgat
gagggtgataaaaccaatgcaacaccctgcttatctcagcccctaccaacagtgtcaccc
agtctgaagagttcgatggctctaataggaggttcccgtatgaagtcaaacatgacacct
cgcttcgatccaacagcacctggagccatagttcttccacggccacgcccagagccgctg
ggaaagacaataatcgatgttgtcgttgaccctctaatatcatcaaaactacgtccacat
caagttgagggtgtaaaattcttgtaccaatgcgtgatggggatgaaccactatgctgga
aaaggcgcacttttggcggatgaaatgggtcttggtaagaccctcttaaccattgcgcta
ctatggacattgttaaagcaaaaccctatacgaggggaacctccagttctgaagagggtg
ctgatagtctgccctgttacactgatagcaaattggcagaaagaatttagaaaatggcta
ggacaggaccgaataggtgtatttgtggcggattctaaagctagaatcagagatttcaca
ggaagtaaggtttactcggtaatgattgtaggctatgaaaaagttcgtactctggtagaa
gagctaaagtctgtaaaatttgacattattgtttgcgacgagggtcatcgcctgaagaac
gcaaccaataaatcaatccaagcattggtggcgctaaacacagagaaaaaaataattctt
agtggcacaccaattcaaaatgatcttggtgagtttttcgttatgattgatttcttaaat
cctggaattttaggaacatatggaagcttcagaaagaattttgagaccccaattatgaga
tctcgacagccaggtgcgctgaaaaatgatgtcactcttggcaagcaaaaatctgaagaa
ctgacacagctaacacagaaattcattcttcgtagaacagcaagcaccttggatagatac
cttccacccaaaacggagtcagttatattctgttatcccactgatacacagctccaaatg
tacaaacaaatccttgattcctctgagctgaagacatatttggggagtaatgatacgtca
gaccacttacgagccattagtctattgaagaagatatgtaactcatcttcactaattcag
cacaatgctcaaggtgatgctgctagcgtttctgcctccttaattgcgaaatcagcaaat
cagcttccactacacagcggcaagataagagctctcctgctattcttaaagtatatatac
aatgacaccaatgagaaggttgtcattgtgtccgggttcacgcaaactttagatatgatt
gaagtacttcttaactacaactctatgagttctcttcgtttagatggttccactgcacag
agcaaaaggcagaaaatcgttgaccaatttaatcaatccgaccagtcgtctagctttgca
ttcctgctttccagtagaagcggtggagtcggtctaaatttggtcggagcctcacgccta
tttttatttgataccgattggaatccatcaatagacttacaagcaatggcaaggattcat
agagatggacagaagaaacctgtgttcatctatcgtttgcttttgtgtggcacaatagat
gagaaaatttaccagcgccaagtaactaaacagggcctagcggatagatttatgagcgtc
gacagtgataaagaggtaacttctgccaaagatccggtcacttttggtgactccaacagc
agtgacaccttcagtgcggatgatctccgggacttatttgtcttacaccaggatacgccc
tgtaacacacacgacatactggagtgtggctgtcttaaaagcgatgctagccaggacccg
gaatattgtgagggatctacggatgcttctatatgctcaaatcagatagagcacatttcc
aatatcgtttacgaaggatcggactcggacgatgatcttggtggctggatgtccgccaag
gctgtcgctcaagaaggtattcatattccaagggctatgaaaaagaaagataggcttaag
ggattatttgactataggcatattgacgttgcatccgacgtgtctcctattgaagacagc
atacttctcaaaataatatcactaagtcctaacactgtatcatttgtctttacgaagtct
actgtcgtcaatgagaatgctagtcaggcggtcgaggaggtcgaggatccgcaacattga
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