Sugiyamaella lignohabitans: AWJ20_2842
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Entry
AWJ20_2842 CDS
T05270
Symbol
NCL1
Name
(RefSeq) Ncl1p
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slb03016
]
AWJ20_2842 (NCL1)
Enzymes [BR:
slb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
AWJ20_2842 (NCL1)
Transfer RNA biogenesis [BR:
slb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
AWJ20_2842 (NCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
30034798
NCBI-ProteinID:
XP_018737694
UniProt:
A0A161HMS9
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Position
B:complement(2604032..2606197)
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AA seq
721 aa
AA seq
DB search
MGKKHFNKKNGGGNGGSRKPSGWLEITRENENLENYYKEQAIIDPSEWDKFKVACQSDLP
VTFRLTGSKKHAIEVRDSMEKNYFPELKGLKWEGEPVPEPKPLAFYPDNLGWQVNVAKQV
IRKNKPFARFQRFLVVETDVGNISRQEAVSMIPPLLLDVEPQHAVLDMCAAPGSKTAQLI
EALHSGPSNPTGFVMANDSDYKRSHMLIHQVKRLNSANMIVTNHDAQMFPKIKTGDNEYL
KFDRVLCDVPCSGDGTMRKNINVWKDWTVGNGLGLHPTQVNILARGVQLLKHGGRLVYST
CSMNPIENEAVVAEVLRQYKDVLSLVDVSDRLPGLIRSPGISSWKVQTKDKAWRQRGEAG
LARSLFSPDQDEADQFHLERTLRVYPHQQDTGGFYIAVFEKKAVDEQPSKKRAIEENGET
VSDDQPEKKIKTDESETGAELVESAVPTPHPIPESEEKPNVVDGESVPSTEQEQSAGDSS
TPKKEKLPRDANEEPFRFVADNHPTVNGCWDFYGISPEFPKNSILVRNETGEPVRTMYYV
APILRPILELNNAIKFVHAGIKMFAQQKNEGNCKWRVQSEGIELLYPYVSESRVVEATGL
DTLKVLCQNSFPRFKDLETLDNKLKEQVEKVTEGCLFLRVPRENGLESLIFPMWRGKSSV
NIMLPKQDTQEVLHRFFGIENLKETKQKSVPAVAVPSAGAETATPEVEEPTAATDAAAPS
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaagcattttaataagaaaaatggaggtggaaacggtggctctagaaagcca
tccggctggctagagattactcgtgaaaacgagaatcttgagaactactacaaggaacag
gccatcattgacccctcagagtgggataaattcaaggttgcttgtcagagcgacctcccg
gtcacttttcgtttaactggatcaaagaaacatgctattgaagtgcgtgactcgatggag
aagaactattttcccgaattgaagggattgaagtgggaaggagagcccgtaccagagccc
aaaccactggctttctatcctgataaccttggatggcaagttaatgtggctaagcaggta
attcgtaagaataagccatttgctcggttccagagatttttggttgtagaaacagatgtc
ggtaatattagtcgtcaagaagcagtctctatgattcccccattgcttctggatgttgaa
ccccagcacgctgttttagatatgtgtgcagcccctggatccaagactgcacagttaata
gaggctcttcactcgggtccttctaatcctactggatttgttatggctaatgatagtgac
tataagcgatcgcacatgttgattcaccaagtcaagagactcaactcagctaatatgatt
gtcacgaatcacgatgctcagatgttccccaagatcaaaactggtgacaacgaatattta
aaatttgatagagtattgtgtgacgttccttgttctggtgatggaactatgagaaagaac
atcaatgtttggaaggactggactgttggtaacggcctgggccttcatcctacccaggtt
aatattcttgccagaggtgttcaactactcaagcatggtggtagattggtatacagcacc
tgttctatgaaccctattgaaaacgaggctgtcgttgctgaggttcttagacaatataag
gacgttttgtcactagtagacgtttctgacagactgcctggtctaattagaagccccggt
attagtagctggaaggtacaaactaaagacaaagcctggagacagcgtggtgaggctggt
ttggcaaggagtctgttttctcccgatcaagatgaagccgaccagttccacctcgagcgc
actctgcgagtttaccctcaccaacaggacactggagggttttacattgccgtttttgag
aagaaggctgtagatgagcaaccatccaaaaagcgtgccattgaggaaaatggtgagaca
gtttctgatgatcagcccgagaaaaagattaaaactgatgagtccgagactggggcggag
ttagtggaatctgcagttcctactcctcatcccattccagagtctgaagagaagcctaat
gtagttgacggcgagtctgtcccttcaactgaacaagagcaaagtgctggtgactcttcg
acacctaagaaggagaagctccccagagacgccaacgaagaaccattccgtttcgttgcc
gacaatcacccaactgttaacggatgttgggatttctacggtatttcgccagagttccca
aagaacagcattttagtgcgtaacgagactggagaacctgtcagaaccatgtactacgtt
gcaccaattctacgacccatcttagagctcaacaatgccatcaagttcgtccacgccgga
atcaagatgttcgcccaacaaaagaatgagggcaactgcaaatggcgtgtccagtccgaa
ggtattgagcttctatatccatatgtcagcgagtctcgggttgtcgaggccactggtctg
gatactcttaaggttctctgtcaaaactcgttcccacgatttaaagatctcgagaccctg
gataacaagctgaaagagcaagttgaaaaagttactgaaggctgtcttttcctgcgtgtt
cctcgcgagaatggcctggagtcactcattttccccatgtggagaggaaagtcttctgtc
aacataatgcttcccaagcaagacacccaagaagtactccaccgattcttcggtatcgag
aaccttaaagaaaccaagcaaaagagcgtccctgctgtcgctgtccccagcgcaggtgcc
gaaaccgctactcctgaagtcgaggagcctaccgctgctactgatgccgctgctccttcc
gcttga
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