Sugiyamaella lignohabitans: AWJ20_3012
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Entry
AWJ20_3012 CDS
T05270
Symbol
SPT15
Name
(RefSeq) TATA-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AWJ20_3012 (SPT15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slb03000
]
AWJ20_3012 (SPT15)
03021 Transcription machinery [BR:
slb03021
]
AWJ20_3012 (SPT15)
Transcription factors [BR:
slb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
AWJ20_3012 (SPT15)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
AWJ20_3012 (SPT15)
RNA polymerase III system
TFIIIB
AWJ20_3012 (SPT15)
RNA polymerase I system
SL1/TIF-1B
AWJ20_3012 (SPT15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
30034988
NCBI-ProteinID:
XP_018737862
UniProt:
A0A167FJL4
LinkDB
All DBs
Position
B:3039447..3039860
Genome browser
AA seq
137 aa
AA seq
DB search
MRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFDAKFTDFKIQNIVGS
CDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEI
YAAFEAIYPVLSEFRKA
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcgtgagccaaagaccactgctttgattttcgcatctggtaagatggttgtg
actggtgcgaagagtgaggacgattctaagttggcttccagaaagtatgcaagaatcatt
caaaagcttggatttgatgctaagtttactgatttcaaaatccagaacattgtcggaagt
tgtgacgtgaagttcccaattcgtttagaaggtttggccttcagccacggtactttcagt
agttatgagcctgagttgtttccaggtttgatttaccgaatggttaagcccaagattgtg
ctcttgatttttgtgtcaggtaagattgttcttactggtgcgaagcaaagagaggaaatc
tatgctgcttttgaagccatttaccctgtattgagtgaattccgtaaggcttga
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