Sugiyamaella lignohabitans: AWJ20_3019
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Entry
AWJ20_3019 CDS
T05270
Symbol
NOT3
Name
(RefSeq) CCR4-NOT core subunit NOT3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWJ20_3019 (NOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3019 (NOT3)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AWJ20_3019 (NOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AWJ20_3019 (NOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
ABC_tran_CTD
DASH_Dad4
Snapin_Pallidin
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
30034995
NCBI-ProteinID:
XP_018737869
UniProt:
A0A167FJU6
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Position
B:3059321..3061285
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AA seq
654 aa
AA seq
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MDRVFKRVAEGIVVFDGIYEKVQNSTNHSQKEKLESDLKREIKKLQRLRDQIKTWMGSND
IKDKKALAEQRRLIEQEMERFKACEKEMKTKAYSKEGLTSYSRSDPREKEKAEALTFIGS
MLEELEQQIETLESEQDSLQSTMKKGRKDTSKSDRISEIEDTLDRHKWHISKLEIMSRMI
DNGTLLPESVMSLQDDIKYYVESNQDADFAEDEEIYDELNLEDDMDYEAEPIPVKEEGTS
LEDLAMELSKDIEKQKQQHAAEVAAAAANTNGTNVVPATSVVPPAISSASRRTVSSPSVG
NTGLSGKSITANNGVTSSQTTAPILSRTATSELKYSSAAGASIPQGLSPLPPPKSQPGLA
SSIPSGPGQGTASTSAPNPGLDSASPSPVISSSVINNVSNTPRKPQAVTSGSVTSSGVPW
AERLDSSRKTSDDQAKGSPSVSGSAASSPRLSNVPPLSPSLSTTTATTATTSTSINNGPS
SITFPKFSLPPGLQDLAHAFDSARRRIGSPEPISSIGKLLEASFLNCPDSLIADKPRYYH
PESPFPTPAYYPQEPLTNLDSASIMSKMDLDTLFYIFYYRQGTYQQYQAAKELKNRSWRF
HKLFLTWFQRHEEPMVISSEFEQGTYRFFDFEGSWMQRRKANFKFEYQYLEDEI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgttcaagcgggttgctgaagggattgtggttttcgatggcatatatgaa
aaagtccaaaactcaactaatcactcacaaaaagaaaaactggaatctgacctgaaacga
gaaatcaagaagctacagcgattgcgggatcagattaagacatggatgggaagtaatgat
attaaggataaaaaagcattagctgaacaacgacgactaattgagcaagagatggaacgc
ttcaaggcctgtgaaaaggagatgaagacaaaagcgtattctaaagagggcttgactagt
tatagtaggtcggatcctcgtgagaaggaaaaggctgaggcattaaccttcatcggctcc
atgttggaggaactagagcaacagatagagactctggaatcggaacaagatagcttacag
tcgactatgaaaaagggtcgtaaggatacatcgaagtcagataggatatctgaaattgaa
gatactctggatcgtcataaatggcatatttctaaattagagattatgtcgagaatgatt
gataatggtacgttactaccggagtctgtaatgagcttacaggatgatataaaatactat
gtcgagtccaatcaagatgcggattttgcagaggatgaggaaatctatgacgagttgaat
ctggaagacgatatggattatgaagccgagcccataccggtaaaggaagaaggaacttca
ctggaggatctagcgatggagcttagtaaagacattgagaagcaaaagcagcagcatgct
gctgaagtagcagcggccgcagctaatacgaatgggacaaatgttgttccagcaactagt
gtggtaccccctgcgatttcatctgcatcgcgaagaactgtatcatcacctagtgtgggg
aatacaggattatcaggaaagtcaattactgccaataatggtgtcacttcaagtcagact
acagccccaattctgtcacgaactgccacttctgaactcaagtattcatctgccgctggt
gcgtccataccccagggactatccccgctgccaccaccaaaatctcaaccaggattagct
tcttcaattccgtctgggcctggtcagggaacagcaagtacatcagcaccaaatccagga
ctcgactcagcatctccatcgcctgtaatatcatcatctgtcattaataatgtaagcaat
actcccagaaaaccacaagcagtgacgtcaggttcagtgaccagttcaggcgtaccctgg
gcggaaagattggattcatcaaggaagacaagtgatgaccaagccaaaggttcaccgtct
gtcagtgggtcggctgcgtcctctccacgactatcgaacgttcctccattatcgccaagc
ttgtccaccacgacggcgacgaccgctacgacgagcacgagtatcaataatggccccagt
tctattacatttccaaaattctctctgccaccaggactgcaagatctggcgcatgcgttt
gactcggcacgtcggagaataggatcgcctgagccaatttcaagtattgggaagctattg
gaagcatctttcttgaattgtccagactcattaatagcggataaaccacggtattatcac
cctgaatccccattccccaccccagcttattatccacaggagccactgacgaatttggac
tcagcttcaattatgagtaaaatggacctcgatacgctgttctatatcttttattaccga
caaggtacctatcaacagtatcaagctgcgaaggaactgaagaaccgtagctggcgtttc
cacaagctgtttttaacatggtttcaacgacatgaagagcctatggtaattagcagcgag
ttcgagcaaggcacctataggtttttcgattttgaaggctcgtggatgcagcgacgaaaa
gccaatttcaagttcgaatatcaatatcttgaagatgaaatttaa
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integrated database retrieval system
