Sugiyamaella lignohabitans: AWJ20_3112
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Entry
AWJ20_3112 CDS
T05270
Symbol
MTR3
Name
(RefSeq) Mtr3p
KO
K12587
exosome complex component MTR3
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWJ20_3112 (MTR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3112 (MTR3)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AWJ20_3112 (MTR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
30035099
NCBI-ProteinID:
XP_018737961
UniProt:
A0A167FML4
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Position
B:complement(3334866..3335684)
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AA seq
272 aa
AA seq
DB search
MSVLQDRRRVLPPVDTIPLQFKEDEGSSGSKETTIARTRTIRPIFIKQSVVANASGSAYL
EVEDIKLQCSVYGPKPIRGSFTQQADLLVEAKLPSLGQDASNDKSASIEKDITSFVQTSI
TPGIILTQYPKSCINIMITVISADLENRNFKSLLAAATNVASLALVDAGIALYDIVTSAS
VLLSRNENGESLYFDPETPRESEDIEGVLSFMTGQDESNIVGMWLDGENITSKNLTTLTE
SAKEAACQIRTLFNGVILQEFHDKEQEASNSK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcttacaagatagaagacgagtgctcccaccagtagatacgatacctctacaa
ttcaaggaagatgaagggtcctcagggtcaaaagagactactattgcccgaacgcgcaca
attagaccaatatttattaaacagagtgtagtagccaatgccagtggttctgcctacctc
gaggtggaagatatcaagttacaatgctcagtttacggacccaagccaataaggggatca
tttacacaacaagcggatttattagtagaagccaaattgcccagcttaggacaggatgca
tccaacgataaatctgcgtcgattgaaaaagatatcacttcatttgtacaaacatcaatt
actcccggtattatcttaactcagtaccctaaaagttgcattaatattatgatcacagtc
atttcggctgatctcgaaaatagaaacttcaagtcattactggctgcggctactaatgtc
gccagtcttgcccttgtggatgctggcattgctctctacgatatagtcacctctgcttca
gtactgttgagtcgaaatgagaatggggaaagtttgtactttgatccagagaccccacga
gaatcagaagacatcgaaggggttcttagtttcatgactggtcaagacgaaagtaacatt
gttggaatgtggcttgatggagagaacatcaccagtaaaaatttgacgaccctgactgaa
tctgcaaaggaagctgcttgccaaattagaacactatttaacggcgttatacttcaagag
tttcatgataaggaacaggaagcttcaaattctaaataa
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