Sugiyamaella lignohabitans: AWJ20_3134
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Entry
AWJ20_3134 CDS
T05270
Symbol
DBP2
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_3134 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slb03041
]
AWJ20_3134 (DBP2)
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_3134 (DBP2)
Enzymes [BR:
slb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWJ20_3134 (DBP2)
Spliceosome [BR:
slb03041
]
Complex A
U1 snRNP components
U1 related factors
AWJ20_3134 (DBP2)
Complex B
AWJ20_3134 (DBP2)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
Pre-60S particles
Helicases
AWJ20_3134 (DBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
30035123
NCBI-ProteinID:
XP_018737983
UniProt:
A0A167FNB4
LinkDB
All DBs
Position
B:complement(3381276..3382622)
Genome browser
AA seq
448 aa
AA seq
DB search
MTYDGGSTYSSGGGRYNSYGNGGGYGGGRNGGSGGRGGSGGYGSGYRGGNGGGRGFGGRD
SGYGGGDRMSNLGDNLQKQEFDLDSLPKFEKNFYQENEVVANRSDEEVAAFRKQQNMTVY
GTNIPKPVETFEEAGFPPYVLKEIQQQGFPNPTAIQSQGWPMALSGRDVIGIASTGSGKT
LSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECSKFGRSSRIRNTCVYGGV
PRGQQIRDLARGVEICIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI
VDQIRPDRQTLMWSATWPKEVQRLAHDYLKDYIQVNIGSLELSASHNIKQIVEVVSEYEK
RDKMVKFLTDAMEDKNSKILIFTGTKRVADDITKYLRQEGWPALAIHGDKQQSERDWVLN
EFKTGRSPIMVATDVASRGIGTYLKCPG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacttacgacggtggttctacttacagcagcggcggcggtcgttacaatagctatgga
aatggtggtggttacggtggcggccgtaacggaggctctggtggccgtggtggaagtggt
ggctatggtagcggatacagaggtggaaacggtggtggccgtggtttcggcggtagagac
agtggctacggtggtggtgacagaatgagcaacttgggtgataacttgcaaaagcaagaa
ttcgaccttgacagcttgccaaagttcgagaagaacttctaccaagaaaatgaagttgtt
gccaacagatccgatgaggaggtcgctgctttcagaaagcaacagaacatgactgtgtat
ggaaccaatattcccaagccagttgaaactttcgaggaagccggtttcccaccttatgtt
ttgaaggaaattcaacagcaaggattccccaaccccactgctattcagtctcaaggttgg
cccatggctttgtctggtagagatgttattggtattgcttcaactggttctggtaagact
ctcagttactgtcttcctgctattgtccacattaatgctcaacctttactttctcctggc
gatggtcctattgttcttgttttagctcctacccgtgagttggctgttcagattcaacaa
gaatgtagcaagtttggtcgttcttctcgtatccgtaacacctgtgtttacggtggtgtc
cctcgtggtcaacaaatcagagacttggctcgtggtgttgaaatctgtattgccactcct
ggtcgattgattgatatgattgaaagtggaaagaccaatttgcgtcgtgttacttatctt
gttttggatgaggcagaccgtatgcttgatatgggtttcgagcctcagatcagaaagatt
gtcgaccaaattcgtcctgaccgtcaaactcttatgtggtctgctacctggcctaaagaa
gttcaacgattggctcacgattaccttaaggattatattcaagtgaacattggttctttg
gagctttctgcttctcataatattaagcaaatcgtcgaagttgtcagcgagtatgagaaa
cgtgacaagatggttaagttcctcactgacgccatggaagacaagaactctaaaatcctt
attttcacaggtactaagagagttgctgatgatattaccaagtatcttcgtcaagaagga
tggcccgctcttgccatccacggtgataaacaacaatcagaacgtgactgggtcctcaac
gaattcaagactggtagatctccaatcatggttgccactgatgtcgcttctcgtggtatt
ggtacgtatttgaaatgccctggttag
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