Sugiyamaella lignohabitans: AWJ20_3168
Help
Entry
AWJ20_3168 CDS
T05270
Symbol
RNT1
Name
(RefSeq) Rnt1p
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AWJ20_3168 (RNT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3168 (RNT1)
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_3168 (RNT1)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_3168 (RNT1)
Enzymes [BR:
slb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AWJ20_3168 (RNT1)
Messenger RNA biogenesis [BR:
slb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWJ20_3168 (RNT1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
90S particles
RNase
AWJ20_3168 (RNT1)
Prokaryotic type
rRNA processing factors
AWJ20_3168 (RNT1)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AWJ20_3168 (RNT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Ribonuclease_3
Ribonucleas_3_3
RNase_3_N
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
30035160
NCBI-ProteinID:
XP_018738017
UniProt:
A0A161HHL3
LinkDB
All DBs
Position
B:3475009..3476568
Genome browser
AA seq
519 aa
AA seq
DB search
MIFEKVQTKERKLKSWDKQHQSQGLKGKDPARMNPQHVKSSKPQDISIEQLEQIKWTMIT
ISTELKNLLAICPKLAEMDLSELDEYYDQGFYEHKPPESTIDKTKTKSPSTVLIENLDIN
VSHIIRESPIIRTAWEIKHSYEGYQLPILDSIMNFESLPVVDKYVSPYRPSTSDIEDSND
VIYWPPPLPPIKDKRLENQVFTHKSVANEWGNYKQTKDNERLEFIGDAVLNFTVSNIIYE
WFPDANEGDLTNMRSLLACNSTLWDVCTMYGIDKSLDTGFEMISEIDGKKSKVVADIMEA
YIGALYTETEEGPTVVKEWLIDLFKPMMRELHKQKVAEEPIDREAKQRLYGLISIADVGP
EYTTLIEGNSEYPFVVQCVMGGEVIGVGVGNSMKTAGLRAAMMALSTPVTISRWLAKRRQ
VSMGRTVIPKASSSKKQATKSPGTGPKSELYAIIGSAEQRPVYSCIPVAEGFKAKVSIFG
EFLGEGIGRTKKLAEAEAAQDALVNNKSTISRWAIATKD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgagaaagttcaaacaaaagaaagaaaactcaagtcttgggacaagcagcac
caaagtcaaggattgaagggaaaagatcctgctcgcatgaacccccagcatgtcaagtct
tcgaagcctcaggatatatcaattgagcaattggagcaaatcaagtggacgatgataacc
atttcaacggaattgaagaatttgcttgccatatgtccaaagttggccgaaatggacttg
agcgaacttgatgaatactatgatcaggggttttacgagcacaaacctcctgagtctacg
attgataagaccaaaactaaatcgccttctactgtattaattgagaaccttgatatcaat
gtttctcatatcattcgagaatcgcccattattcgtacagcttgggaaataaagcactcc
tatgagggataccagttaccaattcttgatagtatcatgaattttgaatctctcccagta
gtggataaatatgtgtcgccctatagacccagtacgtcagatatcgaagatagtaatgat
gtcatctactggccaccgcctttacccccaataaaggacaagcggttggaaaaccaagtt
tttactcacaagtcggttgcaaatgaatggggcaattataaacaaacaaaagacaacgag
agacttgaatttatcggtgatgcagtcttgaatttcacagtttcaaatattatttacgaa
tggtttcccgatgccaacgagggcgatttgactaatatgcgctctcttcttgcatgtaat
tcaactttgtgggatgtgtgtaccatgtatggaattgacaaaagcttggataccggcttt
gagatgattagtgaaattgatggtaagaagtctaaagtggtagctgatatcatggaagcc
tatattggtgctctgtacactgagactgaggagggtcctaccgtcgtaaaagaatggcta
atagacctgttcaagccaatgatgagagaactacataaacagaaagtggcagaagagcct
atcgacagggaggccaaacagagattgtatggattgattagtattgcagatgtgggcccc
gaatataccactttaattgaaggcaacagcgagtacccttttgttgtacaatgtgtgatg
gggggcgaagttattggggtaggtgtgggtaactctatgaaaacagcagggctccgggct
gcaatgatggctctttctactccggtgactatttctagatggcttgcaaaaagaagacaa
gttagtatgggaaggaccgttattccaaaagcaagttcatccaaaaaacaagcaaccaag
tcacccggtactggccccaaatcggagctttatgctataattggatcagcggaacagcgt
cctgtttattcttgtataccagtcgccgaaggctttaaagccaaggtctctatttttggg
gaattcttaggagaaggaatcggtcgtaccaagaaacttgctgaagcagaggcagcacaa
gatgctctcgtgaataataaatccacaatttccagatgggctatcgccactaaggattga
DBGET
integrated database retrieval system
