Sugiyamaella lignohabitans: AWJ20_3182
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Entry
AWJ20_3182 CDS
T05270
Symbol
THO2
Name
(RefSeq) Tho2p
KO
K12879
THO complex subunit 2
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
slb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_3182 (THO2)
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_3182 (THO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3182 (THO2)
03041 Spliceosome [BR:
slb03041
]
AWJ20_3182 (THO2)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AWJ20_3182 (THO2)
Spliceosome [BR:
slb03041
]
Complex C
Other components
EJC/TREX
AWJ20_3182 (THO2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AWJ20_3182 (THO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
Motif
Other DBs
NCBI-GeneID:
30035176
NCBI-ProteinID:
XP_018738031
UniProt:
A0A167FQ00
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All DBs
Position
B:complement(3518374..3521394)
Genome browser
AA seq
1006 aa
AA seq
DB search
MERRPVTNVRQWHPLLREIISSIPDVLPKSEWDFLKPGFYVTFWQLSLYDVQYPEDKYEV
EQKRLTAAVATVSSSITTLEKSRNSDSSQIRQKRAEREQLMAQGTKLIAESKRHALHYSK
SIARLQAEKDLWFSQDASDSEAAPDSSESVPGKIRRRNQSKQLLAHCLLPRAIHSPVDAM
FCSRFIELLHGLGTEGFSTLQFFDALFSDDMLYATLLTCTPYEAENLGIFLSQVFTVLSK
WHASEEVYTAQGLGESIGKGENDEEIVKYLPTMRLKYEGDNLTYLAYEDFKRILGKWHRS
TAATVMGCLESKDYMHRHNAITMLKNVMGVFPIIEHLAWEICDLLETIGKEEDREDLKLA
ATALAGHLNSKSKEWIPMDKFQLVTDDMKRQLDLAKEERLRKKVLANSQQQQRQNQQQTP
TAPASSLAASASSQPTGPASLESRTRDSRGGTPLGPQALQSKGATNENSKEGRDETRGRD
SKRASAVNTPSDTPRNRSPRRTLSPSGGRMDYRDRDRDRNTRGAGGRDRRDDRAGGREWP
SRGDQWDRRENRKEDVGESDGPALSRTASQNQNRGRNLRDGKEPARRDGRDGPRDGPRGG
PRDGGRDGGRDGPRDGPRDGPRDGPRDGGRDGRDSGRDRDLVDNKEPTGPRDQRFQRNGR
DFKESEQGESKNQRKDQRMQRLQKSLLDSSNDRPESSRDQRNSGGRQSDLLDTTRGPSQA
ASRPDSNDRSRNNDSSGSVNSIPLGPKKIASRGQKDKDEGPPPPASSLSVGDERRNNRES
REREREQRERERERDRDLRERAWDKDQGPDQRDRDRDRDRDRDRDRDQRNQREPYGRDHG
RGRDVDRRDHGRDTLRNGRDRDSRDTRDSRDSRDARDSRDRHRNLTGSTSEQQPLPLHPP
SEAPNDQTNDRRRSGYRGRGRDVSDDHSTATSLPPLPPPSDPPAAAPPSTGPSSAPGPSN
GGRSYQRRGRDGREREDPNYRRTKRRAEDDSANQSQTDREKRMRKK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcgaccagttactaacgttagacagtggcatcctttattgagggaaattatt
tcttcaattcctgatgttctgccaaaatcagaatgggatttcttaaagcccggattctat
gtaacattttggcagttgtcgttgtatgatgtgcaatatccagaagacaagtatgaagtc
gagcagaaacggttgacagcagctgtggccacagtttcttcttcaattaccaccctggag
aagagtcgtaactctgactcgagtcagatcagacagaagagagcagagcgtgaacagctc
atggcacaaggtacaaagctgattgcagagtctaaacgtcatgctttacattatagcaaa
tcgatcgctagattgcaggcagaaaaagacttgtggttcagccaggatgcttctgattca
gaagctgctcctgattcatcagaatcggtacctggtaagataagacgaagaaaccagagc
aagcaacttttagctcattgtttacttccgcgagcgattcattcgcctgtagatgctatg
ttttgttcacgttttattgagttattacacggacttggtactgagggattctctacattg
caatttttcgatgctctattttcagacgacatgctctatgctactttattgacgtgtact
ccatatgaagcagaaaacttgggtattttcttgtctcaagtattcacagtgttgagtaaa
tggcatgcaagcgaagaagtgtataccgctcaaggactgggtgagagtattggaaagggc
gaaaatgacgaagagattgttaaatatcttccaacaatgaggctgaaatatgaaggagat
aacctgacatatttggcctatgaagatttcaagcgtattctcggtaaatggcatcgttcg
actgctgctactgttatgggttgtttagagagtaaggactatatgcatcgtcataatgct
attaccatgcttaaaaatgtgatgggagtgttccctattattgagcacctagcatgggaa
atctgtgacttacttgaaactattggcaaggaagaagatcgtgaagacttgaaactggca
gccacagcacttgctggccacttgaattcaaaatcaaaagaatggattccaatggataaa
ttccaattagtaacggacgatatgaagagacagttggatttggctaaagaagaacgactt
cgcaagaaggtacttgcaaattctcaacagcaacaacgacagaatcagcaacagactccc
acggctccagcgtcatcgctagcagcttcggcgtcttcccaacccactggtcctgcatca
ttagaatcaagaactcgagattcacgcggtggaactccattgggaccacaggctctgcag
tctaagggggctactaatgaaaattctaaggaaggacgagatgaaaccagaggtagagac
tcgaaacgtgcctcagctgttaatacaccctcggacacacctcgaaataggtcacccaga
cgaactttatcgccctctggtggtcgtatggactacagagatcgggatcgtgaccgtaat
acccgaggagctggtggtcgtgacagacgagatgaccgtgcaggaggaagagaatggccc
tcacgaggtgaccaatgggaccgtcgagaaaaccgaaaagaagacgttggtgagtctgac
gggccagctctttctagaactgcttcgcagaaccaaaatcgtggtagaaatttgcgtgat
ggaaaggagcctgctaggagagatggaagagatggaccaagagacggaccaagaggcgga
ccaagagatggtggaagagacggcgggagagatggaccaagagacggtccaagagacggt
ccaagagatggtccaagagacggtggaagagatggacgagacagtggacgagatcgcgat
ctggttgacaacaaagaaccaactggacccagagaccaaaggtttcaaagaaatggtcga
gactttaaagagtctgaacaaggagaatccaagaaccaacgtaaggaccaacggatgcaa
agattacaaaagagtcttctcgatagcagcaacgaccgacctgaatcgtcacgagaccaa
cgtaacagcggtggtagacagtctgatctgttagacacaacaagaggaccatctcaagca
gcctctagacctgacagcaacgacagatcacgcaacaacgattcatctggatcagtaaat
tcaattcctttgggtccaaaaaagatagcatccagaggacaaaaggataaagatgagggt
ccgccaccaccagcatcatctttgtcagttggtgatgaaaggagaaataacagggaatcc
cgcgaacgcgagcgtgaacaacgtgaacgagaaagagaacgggatcgtgatctcagagaa
cgtgcatgggataaagaccagggaccagatcaacgagaccgtgatcgtgatcgtgatcgt
gaccgcgaccgcgaccgcgaccagcggaaccagcgtgaaccctacggacgtgaccatgga
cggggtcgtgatgtagaccgtcgtgaccacggtcgtgacactttacgaaacggtcgtgac
cgagattcccgtgatactcgtgactcccgtgactcccgtgacgcccgcgattctcgagac
cgtcatcgaaacctaaccggttcaacatccgaacaacaacctctaccactacatccacct
tctgaagcgccaaatgaccaaacaaacgacagacgacgttctggctaccgaggaagaggt
cgtgatgtcagtgatgaccacagcaccgccacttcactacctcctctaccaccaccatcc
gacccacctgctgctgcacctccatcaaccggtccctcttccgctcccggaccgagcaat
ggcggtcgcagctaccaacgacgcggccgagacgggcgcgaacgcgaagaccccaactat
cgccgaaccaaacgccgagccgaagacgactcggccaaccagtcccaaaccgaccgcgaa
aagcgcatgcgcaaaaagtag
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