Sugiyamaella lignohabitans: AWJ20_3329
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Entry
AWJ20_3329 CDS
T05270
Symbol
HBS1
Name
(RefSeq) ribosome dissociation factor GTPase HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AWJ20_3329 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3329 (HBS1)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AWJ20_3329 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
Roc
SRPRB
Ras
AAA_22
Motif
Other DBs
NCBI-GeneID:
30035339
NCBI-ProteinID:
XP_018738167
UniProt:
A0A161HHV5
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Position
B:3934513..3936177
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AA seq
554 aa
AA seq
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MVFGVSRNSTYRANTVSHAALALDSDLRNSVIEAFSSPSPDDIVLSAQEQGFSNLEKKLG
GLAMNDQIKKPVASPLPKSTSSAPLKYNISSELVQTKKPSLSFVVIGHVDAGKSTLMGRL
LYDVGAVDKHIIDKYAKESGNVGKGSFALAWVMDQTEEERNRGVTIDIAVSTFYSNGIQF
TIVDAPGHRDFVPNMIAGSSQADVAVLVVDSATNAFESGFSLDGQTKEHAILVRSLGVDR
ILVAVNKLDTVDWSFDRFEEIRIQLTEFLTKVVGFQLSKITFIPVSGLNGDNVVNNKSDV
SWYSSKKTILSELESIAINEKSYSLKKDHEKDFRMIIANFYAVPHTSDVAVQGKIDSGSV
QIGQLLKVIPSGMVTQVRSISPIGEDSSTNKSESKREWAIAGDNILLSVPATSIDLDKVS
VGDVLANQDSNIESVHKFTSRIVVFDVARPLLPGTKVLLHRGRTNEPCKISRLVSILDKS
TGTPIKKKPRFLSSGQTATVDIELEGDQTIPLDTFSNSKELGRFVLRKGGSTIAAGVVDS
LISSKENTPSTVPA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggtttttggagtttcgaggaactctacatatagggctaataccgtctcgcatgcggca
ttggccttggattctgacctacgtaactcggttattgaggcgtttagtagtcctagtcct
gacgatatagttttatcagctcaagaacaaggtttttcaaatttggagaaaaagttggga
ggactggctatgaatgaccaaatcaaaaaaccagtagcctcaccgttaccgaaatccact
tcgtcagctcctttgaagtataacatcagtagtgaactggtacaaaccaaaaagccatcg
ctaagttttgttgtcattggccatgtggatgctggcaaaagtactttaatgggtaggtta
ttgtatgatgtaggcgctgtggataagcacatcatcgataaatatgccaaagaatcagga
aatgtagggaaaggatcttttgcgttagcatgggtaatggaccaaacggaagaagaaagg
aatagaggggtcacaattgatattgctgtcagtactttctattcaaatggaatccagttc
acaatagtggatgcgccaggccatcgagactttgtccctaatatgattgctggttcgtcg
caagccgatgtggcagttcttgtcgttgattctgctaccaatgcttttgaatccggattc
agcttggatggacaaacaaaagaacatgcaatactggtgcgaagtttgggtgtggacaga
attttggtggcggttaacaagttagatactgtggattggtcttttgatagattcgaggaa
atacgcattcaactcacagaatttctgaccaaggtagttggatttcagttatcgaagatt
accttcattcctgtatctggattaaatggcgacaatgtcgtaaataataaatctgacgtt
tcctggtattcatcaaagaaaactattttgtcagagctagaatcaatcgccatcaatgaa
aaatcttattctctgaaaaaggatcatgaaaaggattttcgaatgataatcgcaaatttt
tacgctgttccacatacgtccgatgttgctgttcaaggaaaaattgactctggttccgta
caaatcggtcaattgttgaaggttattccgtcaggaatggttacacaagtcaggtcgata
tcccctataggggaagattcctcgactaacaagtctgaatcaaagcgggagtgggccatc
gctggcgacaacattctactgagtgtaccggcgacaagtatagatctggataaagtcagc
gtaggtgatgttttggctaaccaagattcaaatattgaatctgttcataagttcacatct
aggattgtagtattcgacgtggcaaggcccctccttcctggcacgaaagtgcttcttcac
cggggacgtacaaacgaaccttgtaaaatatccagactagtatccattttagataagtct
acaggaacccctatcaagaaaaagcctcgatttctatccagcggccaaactgctaccgtg
gatattgagctggaaggtgatcaaaccatcccattggacacgttttccaacagtaaagaa
cttggaaggtttgttcttcgtaagggtggttctaccattgcagcaggtgtagttgattca
ctaatttcatctaaagagaatacgccatcaacagtaccagcgtag
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