Sugiyamaella lignohabitans: AWJ20_3340
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Entry
AWJ20_3340 CDS
T05270
Symbol
RNA14
Name
(RefSeq) Rna14p
KO
K14408
cleavage stimulation factor subunit 3
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AWJ20_3340 (RNA14)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3340 (RNA14)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
AWJ20_3340 (RNA14)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
UTP6_C
NRDE-2
Cytokin_check_N
DUF6833
Motif
Other DBs
NCBI-GeneID:
30035352
NCBI-ProteinID:
XP_018738178
UniProt:
A0A167FTY7
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Position
B:complement(3963941..3966637)
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AA seq
898 aa
AA seq
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MSEQLTKEGSNLIDPGAVAAAAAVVLSEVTQTADAPKQTNDGNQSTHEEEQDDDDNVDGE
DGDDGGDEYGDDEDDNISINGANGSNLTPTQKRKLRRKKAKQREQEALQAAGITPALSGA
AASAIGNGSSSSNSSQPAPGIASVSTSSAPIIPPASAVSLTRLPPGTALPTKRKRLPNDT
IGILEDEIEENPEDIDKWSPLVRELKAKDKVDSLRNAFERMVVYFPTSSDIWMDYLDLEQ
SNGEFQKVEQLFARCLPKILNVELWSYYLAYIRRINNINIDGDKARTTISQAYEFVLDRV
GFDIDSGPIWNDYIEFIKSREAGTSWEQQQKMDLLRKTYRRAICIPLSGHLERLWQNYST
FETTLNANTARKFTAEVSGTYMNARSSLREMENIFTGMPRTTSPGLRQWSKKEQKIYEKW
EQWIDWEKRNPLSTGNKALVDARVTYAYKQAVMTLRYFPEVWYSFSLYTLGRGDLSTVSA
ASAPGALASSNSSVDAALEILRNGLQANPSSFLLSYKAAELLEKESRYDELKVIYENLIA
RYKLEREKMVIQNEQFYILLNEAHVYATTQLSLNGKSKKERKAEKHITQKEAEIHSVSRS
ITLAYTEYMKTAKRSQGIKEARRVFGEARRLPYTTHHIFVASAMMEYHNNKEADIADKIF
ELGLKRFSENSEYVKVYFDFLILTNDETNARALFEKSISKMPIAAAKPLYEHFMKFTANH
GELAALLTLEERFSKMYPDESPMSIFARRFRIPEYDPIEDNDLRPNYNNHSLQQRYQQIQ
QIESTSILGSSGGDGDDERSDRGDRKRGGRGGGRRNRDEESDDERPMKRIRESTGFSNSS
GFSTTSSLEQASTNIIPSGILNLLKALPPPEYLDGSVSFDAMKLTDLIRDTTIPDNLL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcagctaacaaaagagggatctaatctaattgaccctggagccgttgcggcc
gctgcggcggttgtattgtctgaagtcacccagactgctgatgctccaaagcagaccaat
gatggaaatcagtctacgcacgaagaagagcaggatgatgatgacaacgtagacggtgaa
gatggcgatgacggaggtgacgaatatggcgatgatgaggatgataacatctctattaat
ggtgccaatggatcaaatttgacccctacacaaaagcggaagctgaggaggaaaaaggcc
aagcagagagagcaggaggctttgcaggcggccggtattactccagctcttagtggcgct
gctgctagtgccattggtaatggatcatcatcgagtaacagttcacagccagcgccaggt
atagcgtcagtctcgacctcaagtgcccccattattccacctgcttcagctgtttcactg
actaggttgcctccaggtactgccctacctacaaaacgaaagagactcccgaacgataca
attggaattctagaagatgaaattgaagaaaatcccgaggatattgataaatggtcgcca
ttggtgcgtgaactaaaggcgaaggataaggtcgatagcctgcgcaatgcatttgagaga
atggttgtatactttccaacatcctcagatatttggatggattatcttgatttagaacag
tctaatggtgaatttcagaaagttgaacagttgtttgcccgctgtctgccaaaaattctc
aacgttgagctttggtcttactatttggcctatattcgtcgtatcaataacatcaatatt
gatggagacaaggctcgaacaactatctctcaagcatatgagtttgtacttgatagagtt
gggtttgatattgatagtggtcctatttggaacgattacattgagtttatcaaatcgcgc
gaagctggcacgtcatgggagcagcagcaaaaaatggatttattacgtaaaacctacagg
agagcgatttgtatcccattatcaggtcacttagaacggctctggcagaactattcgact
tttgagacaacccttaatgcaaacaccgccagaaagttcactgcagaagtcagcggtact
tacatgaacgctcgatctagcctcagagaaatggaaaatattttcactggtatgcccaga
accactagtcccggtcttcgtcaatggagtaaaaaggaacaaaagatttatgaaaaatgg
gagcaatggatagactgggagaaaagaaacccattaagcactggaaacaaggcgcttgta
gatgctcgagttacttatgcttataaacaggcggtaatgactctaagatatttccctgag
gtttggtacagcttctccctatatacattgggtagaggggatctatccacagtttcggca
gctagtgcacctggtgcacttgcgagttccaacagctcagtggatgccgctctggaaatt
ttgaggaatggactacaagcaaatccttcgagttttcttctttcttacaaagcagccgag
ctattggagaaggaatcacgatatgatgagctgaaggtcatctatgaaaatctcattgca
cgatacaagctggaaagagagaaaatggtcattcagaatgaacaattctatattcttctt
aatgaggcccatgtttatgctacaactcaactgtcgttgaatggcaagagtaaaaaggag
cgtaaagcagagaaacatatcactcaaaaggaggcagaaatccactcggtatctcgtagc
ataactcttgcatatacagagtacatgaagactgccaaaaggagtcaaggtatcaaggag
gcacgtagagtatttggtgaagctcgtcggttaccatacactactcatcacatcttcgtt
gcatcagctatgatggaataccataacaacaaggaggctgatattgctgataaaattttt
gagcttgggctgaaaagattttctgaaaactctgaatacgtgaaggtatattttgatttc
ctcatccttaccaatgatgaaaccaatgcccgagctttgtttgaaaagtctattagcaaa
atgccaattgctgcagcaaagccactttacgagcatttcatgaagttcaccgccaaccat
ggcgagctggcagctttgttaactttagaggagagattttctaaaatgtatcctgacgag
agccctatgtccatttttgcacgcaggttcagaattccagagtatgaccctatcgaagac
aatgatttgcgaccaaattacaacaaccacagtttgcagcagagatatcagcaaattcag
caaattgaaagtacatctatactgggtagtagtggtggtgatggtgacgatgaaagaagt
gacagaggtgatcgaaagcgtggtggtcgtggtggtggaaggcgtaatcgcgacgaagaa
agtgacgatgaacgtccaatgaagagaatccgcgagtctaccggattttctaatagtagt
ggattttctactacctcatctttggaacaggcatccaccaatatcattccgtctggaatc
ctgaatctcttgaaggccctcccaccgccagagtaccttgacggctctgtctctttcgat
gctatgaaactgacagatttaattcgtgatacaactattcctgataacttgctttag
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