KEGG   Sugiyamaella lignohabitans: AWJ20_3340
Entry
AWJ20_3340        CDS       T05270                                 
Symbol
RNA14
Name
(RefSeq) Rna14p
  KO
K14408  cleavage stimulation factor subunit 3
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AWJ20_3340 (RNA14)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slb03019]
    AWJ20_3340 (RNA14)
Messenger RNA biogenesis [BR:slb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     AWJ20_3340 (RNA14)
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_Syf1_CNRKL1_C UTP6_C NRDE-2 Cytokin_check_N DUF6833
Other DBs
NCBI-GeneID: 30035352
NCBI-ProteinID: XP_018738178
UniProt: A0A167FTY7
LinkDB
Position
B:complement(3963941..3966637)
AA seq 898 aa
MSEQLTKEGSNLIDPGAVAAAAAVVLSEVTQTADAPKQTNDGNQSTHEEEQDDDDNVDGE
DGDDGGDEYGDDEDDNISINGANGSNLTPTQKRKLRRKKAKQREQEALQAAGITPALSGA
AASAIGNGSSSSNSSQPAPGIASVSTSSAPIIPPASAVSLTRLPPGTALPTKRKRLPNDT
IGILEDEIEENPEDIDKWSPLVRELKAKDKVDSLRNAFERMVVYFPTSSDIWMDYLDLEQ
SNGEFQKVEQLFARCLPKILNVELWSYYLAYIRRINNINIDGDKARTTISQAYEFVLDRV
GFDIDSGPIWNDYIEFIKSREAGTSWEQQQKMDLLRKTYRRAICIPLSGHLERLWQNYST
FETTLNANTARKFTAEVSGTYMNARSSLREMENIFTGMPRTTSPGLRQWSKKEQKIYEKW
EQWIDWEKRNPLSTGNKALVDARVTYAYKQAVMTLRYFPEVWYSFSLYTLGRGDLSTVSA
ASAPGALASSNSSVDAALEILRNGLQANPSSFLLSYKAAELLEKESRYDELKVIYENLIA
RYKLEREKMVIQNEQFYILLNEAHVYATTQLSLNGKSKKERKAEKHITQKEAEIHSVSRS
ITLAYTEYMKTAKRSQGIKEARRVFGEARRLPYTTHHIFVASAMMEYHNNKEADIADKIF
ELGLKRFSENSEYVKVYFDFLILTNDETNARALFEKSISKMPIAAAKPLYEHFMKFTANH
GELAALLTLEERFSKMYPDESPMSIFARRFRIPEYDPIEDNDLRPNYNNHSLQQRYQQIQ
QIESTSILGSSGGDGDDERSDRGDRKRGGRGGGRRNRDEESDDERPMKRIRESTGFSNSS
GFSTTSSLEQASTNIIPSGILNLLKALPPPEYLDGSVSFDAMKLTDLIRDTTIPDNLL
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgtccgagcagctaacaaaagagggatctaatctaattgaccctggagccgttgcggcc
gctgcggcggttgtattgtctgaagtcacccagactgctgatgctccaaagcagaccaat
gatggaaatcagtctacgcacgaagaagagcaggatgatgatgacaacgtagacggtgaa
gatggcgatgacggaggtgacgaatatggcgatgatgaggatgataacatctctattaat
ggtgccaatggatcaaatttgacccctacacaaaagcggaagctgaggaggaaaaaggcc
aagcagagagagcaggaggctttgcaggcggccggtattactccagctcttagtggcgct
gctgctagtgccattggtaatggatcatcatcgagtaacagttcacagccagcgccaggt
atagcgtcagtctcgacctcaagtgcccccattattccacctgcttcagctgtttcactg
actaggttgcctccaggtactgccctacctacaaaacgaaagagactcccgaacgataca
attggaattctagaagatgaaattgaagaaaatcccgaggatattgataaatggtcgcca
ttggtgcgtgaactaaaggcgaaggataaggtcgatagcctgcgcaatgcatttgagaga
atggttgtatactttccaacatcctcagatatttggatggattatcttgatttagaacag
tctaatggtgaatttcagaaagttgaacagttgtttgcccgctgtctgccaaaaattctc
aacgttgagctttggtcttactatttggcctatattcgtcgtatcaataacatcaatatt
gatggagacaaggctcgaacaactatctctcaagcatatgagtttgtacttgatagagtt
gggtttgatattgatagtggtcctatttggaacgattacattgagtttatcaaatcgcgc
gaagctggcacgtcatgggagcagcagcaaaaaatggatttattacgtaaaacctacagg
agagcgatttgtatcccattatcaggtcacttagaacggctctggcagaactattcgact
tttgagacaacccttaatgcaaacaccgccagaaagttcactgcagaagtcagcggtact
tacatgaacgctcgatctagcctcagagaaatggaaaatattttcactggtatgcccaga
accactagtcccggtcttcgtcaatggagtaaaaaggaacaaaagatttatgaaaaatgg
gagcaatggatagactgggagaaaagaaacccattaagcactggaaacaaggcgcttgta
gatgctcgagttacttatgcttataaacaggcggtaatgactctaagatatttccctgag
gtttggtacagcttctccctatatacattgggtagaggggatctatccacagtttcggca
gctagtgcacctggtgcacttgcgagttccaacagctcagtggatgccgctctggaaatt
ttgaggaatggactacaagcaaatccttcgagttttcttctttcttacaaagcagccgag
ctattggagaaggaatcacgatatgatgagctgaaggtcatctatgaaaatctcattgca
cgatacaagctggaaagagagaaaatggtcattcagaatgaacaattctatattcttctt
aatgaggcccatgtttatgctacaactcaactgtcgttgaatggcaagagtaaaaaggag
cgtaaagcagagaaacatatcactcaaaaggaggcagaaatccactcggtatctcgtagc
ataactcttgcatatacagagtacatgaagactgccaaaaggagtcaaggtatcaaggag
gcacgtagagtatttggtgaagctcgtcggttaccatacactactcatcacatcttcgtt
gcatcagctatgatggaataccataacaacaaggaggctgatattgctgataaaattttt
gagcttgggctgaaaagattttctgaaaactctgaatacgtgaaggtatattttgatttc
ctcatccttaccaatgatgaaaccaatgcccgagctttgtttgaaaagtctattagcaaa
atgccaattgctgcagcaaagccactttacgagcatttcatgaagttcaccgccaaccat
ggcgagctggcagctttgttaactttagaggagagattttctaaaatgtatcctgacgag
agccctatgtccatttttgcacgcaggttcagaattccagagtatgaccctatcgaagac
aatgatttgcgaccaaattacaacaaccacagtttgcagcagagatatcagcaaattcag
caaattgaaagtacatctatactgggtagtagtggtggtgatggtgacgatgaaagaagt
gacagaggtgatcgaaagcgtggtggtcgtggtggtggaaggcgtaatcgcgacgaagaa
agtgacgatgaacgtccaatgaagagaatccgcgagtctaccggattttctaatagtagt
ggattttctactacctcatctttggaacaggcatccaccaatatcattccgtctggaatc
ctgaatctcttgaaggccctcccaccgccagagtaccttgacggctctgtctctttcgat
gctatgaaactgacagatttaattcgtgatacaactattcctgataacttgctttag

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