Sugiyamaella lignohabitans: AWJ20_349
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Entry
AWJ20_349 CDS
T05270
Symbol
PRP22
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase PRP22
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slb03041
]
AWJ20_349 (PRP22)
Enzymes [BR:
slb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AWJ20_349 (PRP22)
Spliceosome [BR:
slb03041
]
Complex C
Other components
Complex C specific factors
AWJ20_349 (PRP22)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
30035517
NCBI-ProteinID:
XP_018734589
UniProt:
A0A167CU84
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Position
A:1098352..1100556
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AA seq
734 aa
AA seq
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MVSRGVPPAAGALPQTPLLLLRRRICLDCGEGGGSILTEVEQVIRKSSAVSPSHVSIVVA
SSLSGVYTEVPQYLYQELTDGKILAVVVEDPERSANRLVSAIATESHSVTPDARLERSER
SRGVWGAAPAAGGRQPTQLEAGSVGYTSLFSDFVGAQTRVKYVTAEMLLREALVDPLLRS
YGIVYVEDFHERAAWTDILLGVTKKVLKVRPDDLRVVVHSVTDDVVELLRRFFSPGEDEK
TRPFVVQVKEGEEKSSLVNHVDVLYSTQSYGDYVKAAVDTVTSLYSGESRRLVETATVVV
FLASKGDVSRASQLLKYHSGLPQGIGIATEVETLDMKDLSQGGLIVLTCENGAETNFKML
SCGTVQFVVDCGYRGYKWFQGASDGRGNADINDTVNFPVAKSQAELRKLLASHADGPGKC
FRLYTEAAAFNVLTDGYIPQIQGSSQLPEIILRLKALGIDNIARSFPFLTAPSVDVISRT
LSLLWWHKIIDDYGKLTAMGEKLALLPLDIRLGRAVYLAAQTGCLSEMITIAAMVAVGGL
SAVLMKSEQAMADHKQFYTVEGDYLTLLNIYALYISTRKRDGVSFINKWAKNHGIHGDVL
EGARNIRSQLQTAVNRTGLRQLDTTGKSTSSAPSNPSELANTISNCITQAFFLQVAKRIS
HNTYELVGPHSNSSSTALPDTFCVYSDLTKPLTSPWVVYEKLTQGTDGNIYLTGVNMADR
ATLELTNYYKSIRR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtcggggtgtgcctccggcggctggggcgctgccccagaccccgttgctcctg
cttcgcaggaggatttgcttggattgtggggaaggaggggggtcgatactaacggaggta
gaacaggtgattcgcaagagctcggcggtgtcaccgagccatgtgtctatcgtggttgcg
tcgtcattgtctggcgtttacacagaagttccccagtatctctaccaagagctcacagat
ggcaaaatcctggcagttgtagtcgaggaccccgaacgcagcgccaaccgactcgtatcc
gccattgcgaccgaatcgcactcggtcaccccagacgctcgactcgagcgaagcgagagg
agccggggggtctggggcgcagccccagccgccggaggcaggcagcccacccagctggag
gctggatcagtagggtataccagtttgttcagcgactttgttggagctcaaacgagggtg
aagtatgtcacggcagagatgttgttgagagaggctctcgtggacccgctgctgaggtca
tatgggattgtgtatgttgaggatttccatgaacgggcagcgtggactgatattctgctg
ggagtgaccaagaaggttctcaaggtgagaccagatgatttgagagttgtggttcactcg
gtaacagacgatgttgtcgaattgttacggcgatttttctcgccaggtgaagacgagaag
acgagaccatttgtggttcaggtgaaagaaggagaggaaaagtcgtctttagtgaatcat
gtcgatgtgctgtactcgactcagtcgtatggagattatgtcaaggcagctgtagataca
gtcacgagtctctacagtggtgagtcgagaagactagtcgaaacagctacggtggtagtg
tttttggcgtcgaaaggtgatgtcagtcgagcttcacagctgctgaagtaccattcgggt
ctgcctcagggaatcggtatagccacagaagtcgagacgctggatatgaaagatttgtcg
caaggtggtcttattgtgttgacgtgtgaaaatggtgctgaaaccaacttcaaaatgctt
tcttgtggaacagttcagtttgttgtcgactgtggttaccgcggctataagtggtttcaa
ggagctagcgacggtagagggaatgccgatattaatgatacagtgaattttccggtggcc
aaatcgcaagccgagttacggaaattactggcatctcacgctgacggacctggcaaatgt
tttcgtctttatacagaagctgctgcttttaatgttcttactgatggatatatcccacag
atccaaggaagttcccaactgccggaaatcatcttacgccttaaagcattaggtatcgac
aacatagccagatcgtttccttttctcactgccccatcggtagacgtcatttcacggaca
ctgagtttactctggtggcataagattattgacgactatggcaaactaaccgctatgggc
gagaaactagcactactacctctggatattcgtcttggtcgagctgtctaccttgctgct
caaactggctgtttatctgaaatgattactattgcagctatggtagctgttggcgggctg
tcagcagtgttgatgaaatcagagcaggccatggctgatcataaacagttctacacagtc
gagggtgactatctcactttactcaacatttacgcactgtacatctctacaagaaaacga
gacggtgtctcgttcattaacaaatgggccaagaatcacggaatccatggcgacgttcta
gaaggagctcgaaatattcggtctcaactacaaacggcagtcaatcgaactggactcaga
caactggataccactggcaaatcaacatcttcagcaccttcgaacccttcagaactcgct
aacaccatctcgaactgcatcactcaagcattcttcctccaagttgccaaacgcatctcc
cacaacacctacgagctcgtcggtccccactccaactcctcctctacggccctacccgat
acattctgtgtctacagtgacctcactaaaccactcacctctccctgggtagtatacgaa
aaactcacccaaggcaccgacggcaatatctaccttactggcgtcaacatggccgaccga
gccactctcgagctcaccaactactacaaatccatccgtcggtga
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