Sugiyamaella lignohabitans: AWJ20_3521
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Entry
AWJ20_3521 CDS
T05270
Symbol
PRP45
Name
(RefSeq) mRNA splicing protein PRP45
KO
K06063
SNW domain-containing protein 1
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_3521 (PRP45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slb03041
]
AWJ20_3521 (PRP45)
Spliceosome [BR:
slb03041
]
Complex B
Other components
Prp19-related factors
AWJ20_3521 (PRP45)
Complex C
AWJ20_3521 (PRP45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
30035553
NCBI-ProteinID:
XP_018738354
UniProt:
A0A161HNU4
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All DBs
Position
B:4444588..4446216
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AA seq
542 aa
AA seq
DB search
MMSRQSVGSFLPKPKNAEKENPRYAEVVSEDEADASVSKSTSISIRNESVAIVKPKTSTT
LALQRNSQGALDYSGVIARQGHDSKRIIQTSYSDLIPLRQRAAEINLEKPTQEQVDLTTE
RTKAALEKIISGKVESSRPQSVVKKANEPTYVRYTPASAPASGSAPRQRIIKMVDRAEDP
LAPPKFKHTKVPGGPPSPPPPVLRSPPRKLTAKDQEDWYIPPSVSNWKNPKGFTIALDKR
VAADGRGLQEAVVNDNMAKLAEALYAADRSARDEIRQRAAMQQKLAERENAVKEEKLRQL
AQQAREERTKISASSSATRPRDEFRDRSPVRRKRSVSRSDSRSISRSPDRSRSPSYRRRS
RSPSRSPDRGEQERARIRSERKKEAERELRKSRMGAERRVKMLARENDRDISERVALGVA
KPTRATGESQFDARLFSQTSNSGGLGGSGYSEDQVYDKSLFSAQEAVRSIYRPRGNVDAD
DGGDAELDRINKEKRFQGLGALKESEGGSEGPVEFVKDTDDDPFGVNQMVDQVKKNTKYG
LN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctcgacagtcagttggatcttttctaccgaaaccaaagaatgctgaaaaagag
aatccccggtatgctgaagtagtctccgaagacgaagcggatgcctcagtgtcaaagtca
accagtatatccattagaaatgagtcagttgcaatagtaaagccaaagacctcgactact
ttggcccttcaaagaaattctcaaggtgcacttgattatagtggggttatcgccaggcag
ggccacgattccaaacgtatcatacaaacttcgtactcagacctgattccacttcgacag
cgagctgcggaaataaatctcgaaaagcctacccaagagcaagttgatctcactaccgag
cgtacaaaggctgctctagaaaagatcatatctggaaaggtagaatcatctcgaccccag
tctgtggtcaagaaagccaatgaacctacatatgttcgatatacaccagcaagcgcgcca
gcatcaggctctgctccaagacaaagaattataaaaatggttgaccgagcagaggaccct
ttagcgcctccaaagtttaagcatacaaaagtaccaggaggtccaccttcacctccacca
ccagtactacggtctccaccgaggaaactaacagcaaaggatcaggaagattggtatatt
ccacctagcgtttcaaactggaaaaatccaaagggttttactattgcattagacaagaga
gtggctgctgatgggagaggtcttcaagaagctgttgtcaatgacaatatggccaagctt
gctgaagctttatatgctgctgaccgcagtgcaagggacgagattcgtcagcgggcagcc
atgcaacaaaaacttgctgagagagaaaatgcagttaaagaagaaaaattgaggcagttg
gcccaacaagctagggaagaaagaaccaagattagtgccagttcgtctgccacccgtcct
agagatgagtttagagataggtctccggtcagaaggaagcgatcagtatctagatctgac
tcgcgctcaatatctcgctcgccagatcgctccagatcaccctcatatcgacgccgttca
aggtcaccctcccgctcgccagacagaggtgaacaagagcgtgctcgtatcagaagtgag
cgtaagaaagaagcggagagagaactaagaaagtcgcgaatgggtgctgaacgtagggtt
aagatgcttgctcgcgaaaatgatagagatatttctgaaagagttgcgctaggcgttgct
aaaccgactagagccactggtgaatcgcagtttgatgctcgacttttcagtcaaacatct
aattctggcggtcttggaggaagcggttatagtgaagaccaggtttatgataaatcctta
ttttcagcccaagaggcagttaggtcaatctatcgacctcgtggcaacgtggatgccgat
gacggtggcgatgcagaacttgacagaatcaataaagaaaagcgattccagggacttggc
gccctaaaagagtcggaaggaggtagtgaaggaccagttgaatttgttaaggatactgat
gatgatccattcggagttaaccagatggttgaccaagttaagaagaatactaaatatggc
ttgaactaa
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