Sugiyamaella lignohabitans: AWJ20_358
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Entry
AWJ20_358 CDS
T05270
Symbol
TUB1
Name
(RefSeq) alpha-tubulin TUB1
KO
K07374
tubulin alpha
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04145
Phagosome
slb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
AWJ20_358 (TUB1)
09142 Cell motility
04814 Motor proteins
AWJ20_358 (TUB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_358 (TUB1)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_358 (TUB1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
slb04812
]
AWJ20_358 (TUB1)
04147 Exosome [BR:
slb04147
]
AWJ20_358 (TUB1)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AWJ20_358 (TUB1)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
AWJ20_358 (TUB1)
Cytoskeleton proteins [BR:
slb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
AWJ20_358 (TUB1)
Exosome [BR:
slb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AWJ20_358 (TUB1)
Exosomal proteins of other body fluids (saliva and urine)
AWJ20_358 (TUB1)
Exosomal proteins of colorectal cancer cells
AWJ20_358 (TUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
30035617
NCBI-ProteinID:
XP_018734597
UniProt:
A0A167CUH9
LinkDB
All DBs
Position
A:complement(1137978..1139324)
Genome browser
AA seq
448 aa
AA seq
DB search
MREVISINVGQAGCQIGNSCWELYCLEHGIQPDGFLSADKKDGPRDEGFSTFFSETGSGK
YVPRTIYVDLEPNVVDEVRTGTYRNLFHPEQLITGKEDAANNYARGHYTIGKELIDQVMD
RVRRVADNCNGLQGFLFTHSFGGGTGSGFGALLLERLSVDYGKKSKLEFAVYPAPQNSTS
VVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDMCRRSLDIARPSYDNLNRLIAQVVSSVTA
SLRFDGSLNVDLNEFQTNLVPYPRIHFPLVTYAPVSSAAKANHEANTVQEITNACFEPSH
QMVKCDLRNGKYMATCLLYRGDVVNKDVQQAVATIKAKKSIQLVDWCPTGFKIGICYQPP
QYVPGGDLAKVDRAVCMLSNTTAIADAWSRLDHKFDLMFSKRAFVHWYVGEGMEEGEFSE
AREDLAALERDYEEVGADSTYDEEEAEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagttatcagtatcaacgttggacaagctggttgccaaattggtaactcgtgc
tgggaactgtactgtttggaacacggaatccaacctgatggattcctttctgctgacaag
aaagatggtcctagagacgagggtttttcgacctttttttccgagactggatcgggaaaa
tatgtgccccgtactatttatgttgatttagagcccaatgtggttgacgaggtccgtacc
ggtacttatcgtaacttgttccatcccgagcaattgattactggaaaagaagatgctgct
aataactatgctcgtggtcattataccattggtaaggagttgattgatcaggtcatggac
cgtgtgaggcgcgtggctgataactgtaatggtttgcaaggattcttgttcacccattcg
tttggtggtggtactggttccggattcggcgctcttcttttggagcgtttgtcggttgac
tatggcaagaaatcgaagctcgaattcgccgtttacccagctcctcaaaattcgacttcg
gttgtcgagccttataactcggttcttactacccacaccactcttgagcactcggactgt
acttttatggtcgataacgaggctatttacgatatgtgtcgccgtagtttggacattgcc
cgtccttcttacgacaatttgaaccgattgattgctcaagtcgtttcttcagttactgct
tcgttgcgttttgacggatctttgaacgtcgatttgaacgagttccaaaccaacttggtt
ccttatccccgtatccatttccctcttgtgacctatgccccagttagttctgctgccaag
gccaaccacgaggccaatactgttcaagaaatcacaaacgcctgtttcgagccatcgcat
caaatggtcaagtgtgacctgcgtaacggtaaatacatggccacttgtcttctttacaga
ggagatgttgttaacaaggacgtgcagcaggctgttgctaccattaaggccaagaaatcc
atccaattggtcgactggtgtcccaccggattcaagatcggaatctgctaccaacctccc
caatacgttcccggaggagaccttgccaaggtcgaccgtgccgtgtgtatgttgtccaac
accactgccattgccgacgcctggagcagactcgaccacaagttcgacctcatgttctcc
aaacgtgcttttgtccactggtacgttggcgagggcatggaagaaggcgagttctccgag
gcccgtgaagacctcgcggccctcgagcgcgactacgaagaagtcggcgccgactccacc
tacgacgaggaagaagccgaatactaa
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