Sugiyamaella lignohabitans: AWJ20_3625
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Entry
AWJ20_3625 CDS
T05270
Symbol
RAV1
Name
(RefSeq) Rav1p
KO
K24155
rabconnectin-3a
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
AWJ20_3625 (RAV1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_3625 (RAV1)
Membrane trafficking [BR:
slb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
AWJ20_3625 (RAV1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
AWJ20_3625 (RAV1)
RAVE complex
AWJ20_3625 (RAV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
TPR_GEMI5
PIN_3
Motif
Other DBs
NCBI-GeneID:
30035668
NCBI-ProteinID:
XP_018738453
UniProt:
A0A170QYG0
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All DBs
Position
B:4711936..4715598
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AA seq
1220 aa
AA seq
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MTSASNDEKTEKMPKVIWRKKLANPVNIIQFSVDSWLVASVGEYDKLVKIWKRTSFDKDN
VDFDFNYIPHPARILRMRWQQPFDISQSIENTLYTLADDKVIRIWAPFDSIDMGNLQLWA
SIDLLDHHFGLMLDNRDLSRAIESSVAANGANISDDGKLPRDLSNVISLAQSAPEICITF
NKDKQTISAYKVDNVGLKNKKLAQITKIVDDQKLTLSEANLFPFKADRLDFFTYAAQANS
TTSDLASLSILIHDYCGTIYNVAIDIAKLLNSDTNRERRFLLKAIITGHNKSVRRITRSG
DGKLLLTQSRFSENALWKPQVLPIGVTLRKCSWLHSESGTVTQSVLVPDSDYAITLLDCQ
QLIVWDCRSQVAVQIGTDEIKLEHIAEPMCMLLLPEAEQSGSLHLIIVYDENNILVWSID
IEGQKANVKCNGNFPLPAFGENEKLHLAVPVDPVGWHVTVGSTLDTFQREVIITVSNTGV
LRGWTARINAAEELEWLETSEVYTGVAGIVRAQVSSTKKVAITNSDCTELSIWDTSNALL
EFKETFPAENSISDLDWTTTPDDQCVLGVGFAQQIVLYCQQRFDYTNKTPSWAPFRRVDI
SKYTSHKIGDSIWLKDGTFVVGAGNQLFVQDRNADINDETTRQLLGSRYTRATLDNISTI
FDICSVLNGPLPLYHPQLLIQSILADKMVMVKHILCVLLKRLKFATISDLQVADLESNLG
LDPAEIALDSEAYCEKLEGEQFEAFGRQVCDDLMEWLQKVSLPYLTRHQQITLASVIEAL
SYIDEQARSLDSNGIKYLLGFKLYKIHKGIQDAMSMRDFNWALHSESQNLLLDMVKQQTS
TSALLWPAVREVGVAFWLRNDPLKELFELLARNYFGADEKRDPVTCSLYYLALRRKQILI
GLWRTASWHKEQQKTIQLLSRDFTDDRWKSAARKNAFALLGKHRYEYAASFFLLADSLRD
ALNVLVKHVGDLPLAIAVARVYQGDHGSELRNLIKGHIIPMASTSGDKWLMSWALWMLKD
RQAAINALAWGITDNEVDGSRTPVGGHQQPQFQGRSVSFLVDDPVLVMLYRYLQEQERRR
APSRTTPMVSRFGSPSLKPIGSGGHTPQKHVLNRDTELRFVLKTASIFCRMGCDILALDL
VRRWKFFNTNNTYVRTLKDTNTSSLLDKPNDLLTTAAKIVESNPQDQFNEKISTSAKNKL
QPVAAVAFEEPDMSSFNFGF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgctagtaacgatgagaaaacggaaaaaatgcctaaagttatttggagaaag
aagcttgctaaccccgtaaatataatccagttttcggttgattcatggctcgttgcgtca
gtgggcgagtacgacaagcttgtcaagatctggaagaggaccagcttcgacaaggacaat
gtagactttgatttcaattatattccacatccggccaggattctaaggatgaggtggcag
caaccatttgacatttctcagtccattgagaatactttatatacgttggcagatgataag
gtaataaggatttgggcgccattcgactccatcgacatgggaaatcttcaactatgggca
tctatagatttactagatcatcattttggattgatgctggataacagagatctttctaga
gctatagagagcagtgtggctgctaatggggcgaacattagtgatgacggtaaactaccg
cgtgacttgtcaaacgtaattagtcttgcccaaagcgcgcccgagatttgcattacattt
aacaaggacaaacaaaccatatctgcgtataaagtagataatgttggtctcaaaaataaa
aaacttgctcaaattacaaagattgttgatgaccagaaactgacattatctgaggccaat
ttattcccatttaaagcggatagactggatttttttacctatgcagctcaggccaattct
actacaagtgaccttgcaagtttgtcaattttaatacacgattattgtggtactatttat
aacgttgcgatcgatatcgccaaactcctcaactcggataccaatagagaacgacgattc
ctacttaaagccataattacgggacataacaaatctgttcgaagaataactcgttcaggg
gatggaaagcttttgttaacacagtctcgattttctgagaatgctttatggaagcctcaa
gtcttgcctattggtgtcactctccgaaaatgcagttggttacactcagaatcaggtaca
gtgactcaatcagtattggttcccgattctgactacgctataacattactcgattgtcag
caattaattgtttgggactgccgctcccaggttgctgtacagataggtacagatgaaatt
aaactggaacatatcgccgaaccaatgtgtatgctcttattaccagaggctgagcagtct
ggcagtttgcatcttattattgtctacgatgagaataatatccttgtgtggtctatagac
atagagggacaaaaagctaatgtcaaatgcaatggtaacttccctctacctgcattcggt
gaaaatgaaaagctccatttagcagtgccagttgatcctgtaggctggcatgttacagta
ggttcaacactagatacttttcaaagagaagtcattattactgtttcaaacacaggtgta
ttaaggggttggacagctcgtattaacgcagctgaagagctggaatggctggagacttct
gaagtatatacaggagtagcaggaattgttcgggcccaagtttcatctacaaagaaggta
gctattacaaattcagattgcactgagctatctatttgggacacgtctaatgctcttctg
gagttcaaagaaacatttccggcagaaaactcaatatcagatcttgattggacaaccact
cctgatgaccagtgtgtactgggtgtgggattcgcacaacagattgtattatactgccaa
cagcgatttgattacaccaacaagactccatcgtgggctccttttaggcgagttgacatc
tcaaaatatacctcacacaaaataggggattctatatggttaaaagatggtacgtttgtt
gtaggtgctggtaaccagttgtttgtccaagatcgcaatgctgatatcaatgatgaaacg
acgagacaattgctgggctctcgatatacgcgtgctacattagataatattagcacgata
tttgatatctgctcggtactcaacggtccgcttccattatatcacccccagctacttatc
caatctatacttgcagacaagatggtcatggtcaagcatatactttgtgtcttgttaaag
aggcttaagtttgctactatctcggaccttcaagtagcagatctcgaaagcaacttgggg
cttgatcctgcagagatagcattggattctgaggcttactgtgaaaagcttgaaggggag
cagttcgaggcatttgggaggcaagtttgtgacgaccttatggaatggcttcaaaaggtg
tcgttaccttacttaaccagacatcaacagatcactcttgctagtgttatcgaagccttg
tcctacatagacgagcaagcacgatcattggactcaaatggaatcaagtacctcctgggt
ttcaagctgtacaaaatacacaagggcattcaggacgccatgtctatgagagattttaat
tgggcattacacagcgaatcccaaaacttactactggatatggtaaagcagcagacatct
acgtcagcgctcctgtggccagcagtaagagaagtcggggtggctttttggttaaggaat
gatcccttaaaggagctatttgagcttcttgcaagaaactattttggtgctgatgaaaaa
agagaccctgttacgtgttctttgtattatctggcactgcgtcgtaaacagattttgatc
ggattgtggagaacagcgtcatggcataaggagcaacagaaaactattcagctgctatca
cgagatttcacagacgacagatggaaatctgctgctaggaaaaacgcgtttgctttacta
ggcaaacacagatatgaatatgcggcttctttctttctccttgctgactccttgagagac
gctcttaatgttttggtgaagcacgttggtgatttaccgctcgctattgctgtcgcaaga
gtgtaccaaggggatcatggttctgagctgcgcaacctgataaagggtcatatcatcccg
atggccagtactagtggtgacaagtggttaatgagctgggcgctatggatgctcaaagac
cggcaagctgctatcaacgctcttgcttggggtattactgataacgaagtggatggcagt
aggacgcctgttggtggacatcagcagcctcaattccagggacggtcagtgtctttcttg
gtagatgatccagtattagtgatgttataccggtacttacaagaacaagaacgaagacgg
gcaccatctcggaccacgccgatggtatctcgttttggaagtccatctttgaagccaatt
ggaagtggtggtcacacacctcaaaaacatgttctcaacagagatactgagttacgtttc
gtattgaagacagcatccattttttgtcgtatgggctgtgacattttagcccttgactta
gttaggcgatggaagtttttcaatacgaacaacacatatgtaagaactctgaaggacact
aataccagtagtttattagacaaacccaatgacctgcttactactgctgccaaaatagtt
gagtcaaatccacaagatcagtttaacgagaaaatctcaacgagtgcaaaaaataagctg
caaccggtcgcagctgtggcctttgaagaaccagatatgagttcatttaactttggattc
tag
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