Sugiyamaella lignohabitans: AWJ20_3643
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Entry
AWJ20_3643 CDS
T05270
Symbol
SPT6
Name
(RefSeq) chromatin-remodeling histone chaperone SPT6
KO
K11292
transcription elongation factor SPT6
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_3643 (SPT6)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_3643 (SPT6)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AWJ20_3643 (SPT6)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
AWJ20_3643 (SPT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
SH2
Tex_YqgF
S1
HHH_3
Motif
Other DBs
NCBI-GeneID:
30035688
NCBI-ProteinID:
XP_018738470
UniProt:
A0A170QYV0
LinkDB
All DBs
Position
B:complement(join(4768008..4772192,4772245..4772421))
Genome browser
AA seq
1453 aa
AA seq
DB search
MSDSKLRDHMDDDEDEIHASNRGHDEEGEDEGSGSDVGVGDNDDSSEEEEEDDEEEMERV
RKGFIVDDDDEDEEENVEESSKKRRKKKRRRPTASVSSDEGNEAEDRERSSHANDDELDQ
DDLDLLLENTGGYRREQEKRFKRLKRAEGADEDSGRSSRRLTDIFSDEEEDRAEDDEDLG
QTRSRLPADEFDDFIEEDEFSDEEARRQEEAEIRTGRPTKSSRGPAALSSQLTGIDEDKL
GEIYEVFGDGEEYEWALEGEDDAVLSGGEENDYGGREGSGREKSGAPELKDVFEPSELSA
RLLTDEDNAIRIKDIPERYQLLRSVLKFDYNLGEEDFAAEQQWVADKLVAAKPLVFIAKP
YLREPFIKAVHKVVEFVSRDHLEVPTIWTHRRDYLIYTHSTLKRENAYESSSSTTTTDNL
LSLDDLWKIVHLDIEFHGLVEKKNSVDRLFKSLDVHDSAFESMFEQAKTLVEYQDLTDYL
QFRYSSQIKDHISTTKFDEDNLNGNGTTTKRHSRFARFERIREGPIYSIVRAFSITADHL
GENIMSDQRLFFSEDPPERPEELAEQTTKETESMTAEYILDSARSMAAEEIFYDPKVRKS
IRDKFAQQAKVDIILTDKGSKKINDASPYIDFKYAINRGFDELRLKPDLYLRMLQAETEG
LVIVRISYPDYKTTLFEKILTRFFMSDNVSDIAAAWNSNRRIVLKEASRKFVPLICRNIK
EDLKTDCLRSLYFDLRKSFGEKLNQAPYKPPGYVAGTTARILAISPGMGDFSKDAVVAVL
VDEEGQAVESVKFGNPRHVEFRQQFIDLVKRRTPDVIGIAGFTVNCSKLFQILQDIVKEE
ELVPGGDADEADNSLLQVVWVQDEVARLYQHSNRALTEFPDQATLGRYSIALARYLQSPL
CEYAALGKEISAITIHPSQSLLPEELFQEAIDSVFVDYVNLVGLDVNEVVRNQYMANLLP
YVSGLGPRKASGILQSIQSHGGQIANRAELVTAHITTKNIFFNCASFLRIAYDKRTLKNE
DTEPLDATRIHPEDYDLARKMAADALELDEEDLVQLENTSGGVIAQLLSDDLEKLNELIL
EQYAEQLEEKYNRKKSHTLELIREELHNHFSEKRASLAALTEYQIFTMLTGETQQSLHNN
MVVPVVIRRANDRGLTVQLSNGIEGEVDGPDMVDDTSISHPSKLFTFGLTIQAVILNIDY
KNFTAKLSTRKKDIQSALDKAKWSKGRDNKKWNVAAEEADRRKIELKQEQEKRSSRIIKH
PLFRLFNSKQAEEYLAPLQRGDLVIRPSSRGNDHIAITWKISEMLFQHLDVVELDKPNEY
SLGRTLQVGKSRYSDLDELIIMHVQAMARKVDEMVASDKFQKGSRAEVEKWLTAYTDASA
NRSVYAFCFDHKHPGYFLLCFKTNRQTPVQTWNVKVIPNGFELMNNSYADVPSLSNGFKK
IFMSRVAAGGTRR
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattctaaacttcgagatcacatggacgatgatgaggatgaaatccacgcatcc
aaccgaggccatgatgaagaaggagaagatgaaggaagcggaagcgatgttggcgttggt
gataacgatgattcatccgaagaagaagaagaggacgatgaagaggaaatggagagagtt
cgaaagggattcattgttgatgacgatgatgaggacgaagaagaaaacgttgaagagtca
tcgaaaaaacgtaggaagaagaagagaagaagaccaactgcttcggtatcttcagacgaa
ggcaatgaagctgaagacagagagaggagcagtcacgcaaatgatgacgaattagaccaa
gatgatttggatttgttgttggaaaatactggtggttaccgacgagaacaagaaaaaaga
ttcaagcgattgaaacgtgccgaaggtgctgatgaggactctggaagatcatctcgaaga
ttgacggatatattttccgatgaagaagaagatcgtgcagaagatgacgaggatctaggg
cagaccaggtcgcggttaccggctgatgagtttgatgactttattgaggaggatgaattc
tccgatgaggaagctcgtcgtcaagaagaagcagagattcgtacaggccgaccaacaaaa
tcttctcggggtcctgctgcactcagcagtcagctaactggtatcgacgaggacaagctt
ggtgaaatctatgaagtatttggagatggtgaagagtatgaatgggctttggaaggtgaa
gatgatgctgtgctttcaggtggcgaagaaaatgactacggcggccgcgaaggaagcggt
agagaaaagtctggcgcaccagagcttaaggacgtttttgaaccaagtgaattatctgca
aggttgttgactgatgaggataatgccattagaataaaggacattcctgaaagataccaa
ctgcttcgctccgttttgaagtttgactacaaccttggtgaagaagattttgccgctgag
cagcaatgggttgctgacaagctagtggctgccaaaccattagtatttattgcgaaacca
tatcttcgagaaccatttatcaaggctgtacataaagttgttgagtttgtttctcgagac
catcttgaggttccaactatttggactcatcgtcgtgattatcttatttatacacactca
actcttaaacgtgagaatgcatatgagtcgagcagctctaccactactactgataacctg
ttaagtttagatgatttatggaagatagtacacttggacattgagtttcatggattggtg
gaaaaaaagaactccgtggatcgtttgttcaaatcattggatgtgcatgactctgccttc
gaatcaatgtttgagcaagctaagactttggttgagtaccaagatttgacagattatctt
caattccgttattcttcacaaatcaaagatcacatatcgactacaaagtttgacgaggac
aatctgaatggcaatggtactaccactaagcgccacagtagatttgcgagatttgaaaga
atcagagagggtcctatttatagcattgtaagagctttctctatcaccgccgatcacttg
ggtgaaaacatcatgtccgatcaaaggcttttcttttctgaagacccaccagagagaccc
gaagaattggccgagcaaactacaaaggagactgaaagcatgactgccgaatatattctt
gattctgcgcggtcgatggcagcagaagaaatcttttatgatccaaaagtcaggaagagt
atacgtgataaatttgcccagcaagccaaagttgatattattctgacggataaaggaagt
aagaagatcaacgatgccagtccatatattgacttcaaatatgctattaaccgaggattt
gatgagcttcgtctaaaacccgatttgtatctacggatgcttcaggcggagacagagggt
ttggttattgtgagaatcagttatccagactataagactactctgtttgaaaagatcctc
acccgtttctttatgtctgataatgtctctgatattgcagctgcttggaattctaaccgt
agaattgttcttaaggaggcttcccgcaagttcgtcccccttatctgccgtaatattaaa
gaagatcttaagacggactgtttgagatctctttactttgatttgaggaagtcatttggc
gaaaaacttaatcaggcaccatacaaaccaccaggttatgttgctggtactacagccaga
attcttgctatttcacccggtatgggcgattttagcaaagatgcagttgttgcagttcta
gttgacgaggagggccaggctgttgagtctgttaagtttggaaaccctagacatgttgag
ttccgtcagcagttcattgatttggttaagcgacggacccctgatgttatcggaatagct
ggttttacagtgaattgttcaaagctttttcaaattcttcaagacattgtaaaggaagaa
gagcttgtacctggtggagatgctgatgaggctgataattcacttcttcaagttgtctgg
gtacaagatgaagttgcaagactatatcagcactccaaccgtgctcttactgaatttcca
gaccaagctacgttaggccgttattctattgctttagctcgttatcttcagtcaccattg
tgtgaatacgctgcgcttggcaaggaaatttcggccattacaatccatccatcgcagagt
ctacttcctgaggaattattccaagaggcgattgattcagttttcgtggattacgttaat
cttgttggtttggacgtcaacgaagtagttcgaaaccagtacatggctaatttgctacct
tatgtttctggattggggccacgtaaggcatcaggaatcctgcaaagtattcaaagccat
ggaggtcaaattgcaaatagagctgagcttgtcactgcgcacatcacaaccaaaaacatt
ttcttcaactgtgctagcttcctaagaattgcatatgataagcgaactctcaaaaatgaa
gataccgagccactagatgcaactcgtattcacccagaagattatgatctcgcacgtaaa
atggctgcagatgcattggaactggatgaagaggatctagtacagctggagaatacgtct
ggtggtgtaatcgctcaacttcttagtgatgacttggaaaaattgaacgagttaattctc
gagcaatacgctgagcagttggaggagaagtataatcgtaagaagagtcatactctggaa
ttgattagagaggaactccataatcatttctcagagaaacgagcatcacttgcagcattg
actgagtatcagattttcactatgttgactggtgagactcagcaaagtttacataacaac
atggttgtccctgttgttattcgtcgtgctaatgatcgtggccttactgttcaattgtca
aatggtatcgaaggtgaagtagatggtcccgatatggttgatgacacttcgatttcccat
ccaagcaagttattcactttcggtctaactatccaagcggtgatcttgaacattgattat
aaaaacttcacggctaagcttagtaccaggaagaaggatattcaatccgctttggacaaa
gccaagtggagtaagggtagagacaacaagaagtggaatgttgctgctgaagaagctgac
aggcggaagattgaacttaaacaggagcaagaaaagcgttccagtcgtattatcaagcat
cccttgttcagactcttcaatagcaaacaagcggaagagtatcttgccccactccagcgc
ggtgatttagtgatccgaccctcatccagaggtaatgatcatattgccataacgtggaag
atctctgaaatgctattccagcatctagatgttgtcgagctcgataagccaaacgagtat
tctctcggaaggacacttcaagtcggcaagtccagatacagtgatctcgatgaacttatt
atcatgcatgttcaagccatggccagaaaggttgatgaaatggttgccagcgataagttt
caaaaagggtcgcgcgcagaggttgagaaatggttgactgcttacactgatgcgagtgcc
aaccgatctgtctatgcattttgctttgatcacaaacatccgggttatttcctgctatgt
ttcaagactaatagacagacgcctgtgcaaacatggaatgtcaaggtcattcctaatggt
tttgagctcatgaacaatagttatgccgatgttccatccttgagtaatggtttcaagaaa
atttttatgtccagagtcgctgctggtggaactaggcgttaa
DBGET
integrated database retrieval system
