Sugiyamaella lignohabitans: AWJ20_3650
Help
Entry
AWJ20_3650 CDS
T05270
Symbol
VPS41
Name
(RefSeq) Vps41p
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04138
Autophagy - yeast
slb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
AWJ20_3650 (VPS41)
04148 Efferocytosis
AWJ20_3650 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_3650 (VPS41)
Membrane trafficking [BR:
slb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
AWJ20_3650 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Vps41
TPR_Vps41
Clathrin
TPR_PEP5_VPS11
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
PEP5_VPS11_N
Beta-prop_CAF1B_HIR1
RNase_PH_C
WD40_Prp19
Vps39_1
WD40_like
VPS11_N
NBCH_WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
30035696
NCBI-ProteinID:
XP_018738477
UniProt:
A0A161HI92
LinkDB
All DBs
Position
B:4787680..4790634
Genome browser
AA seq
984 aa
AA seq
DB search
MTMSEGIEDFAHNGDDLAQQGNREIPDLIAPEGGFSEETTHGDAPQTGHKEDLNEEGGAN
GNEQNNHDEEDNADDDDESSGNGESEDEDENESSASEGDSESDEDEEEPKLKYSRLSDLK
PPVFSNNTVSTFLASETVIVFATHSGIIHMFNPDMSSIRSFRAHRASILSLSTDGTYLAS
GSLDGTVVIVSIMNQKDTSYADFKRPIHAVALDPNYKSTRAYVSAGTAGSVIHSEKNWFG
SRSDTVLYTSEDPIISLNWVNNLIIWMNEDGIILYSTHRKSILRRIDRPANAPRADLYKP
RICFPDSNRIFIAWVDHIWNIKITTGSEAKPKPTIGAPSFLSSSASVLSPHADEIIEVEN
VHKLPWLLSGILPFKDAVMILVYAKADGQEASVSSRKRPTPDPPELKLIDWLTGEETYAD
VLSMRGYERLGLDDYHLGHFHGNRSMPDKYFIVSGTDAIVAEERTMLDRLNWLDEKHMYK
KSWEMSASLVDPISRIAIGIKHVESLIDKEKWGEAAAFLKIILSQPSIDKSVLREEWDRW
GWIFVNSNHISELAQVLPIDDELEIKEDLYDSIINYCLDNDRKTLVSLIYNWPPSLYDYN
LLKNQLEDLINESETSSSINQMRMALADLYTRTNDPLSALQHLLALHHATVIDHISKYHL
LPQIHAMIPQVFIYNLTDEELENAPLEVIRDKTKHTINLFVEGRHQLEPKVIIRALSGNN
KLDVMLFLYLEELTIKDSFISREFANLQIKLYAEFDRRKLMGFLNRNSHYNLTEALKVCD
QNNYTPELVYLLGKVGQHQRALRLIIEKIGDPEQALEFAKSQNDQDLWNDLIHHSLKHPL
FIKVLLEKGNGSIDPVQLIRDIPPGTSIPGLKEALLNLFRDKEMLQSLNMGALDIIKDEG
KSYSQHLRSIRLKGDSVDFNTEHPDLDLSVPYVLTPSGEIKSEEELIGRKIPYIGDSDQE
SDRPRWSVAYKVRRLKHILDYLHF
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgagcgaaggaattgaggattttgctcataatggagacgatttggctcaacag
ggaaatagagaaatccccgacttaatcgctccggaaggaggattctcggaagaaacgacg
catggtgacgcgccccaaactgggcacaaggaagatctaaatgaagagggtggagccaat
ggtaatgaacagaataatcatgatgaagaagataacgcagacgatgacgatgaatctagt
ggaaatggagaatccgaagatgaggatgagaatgaaagctcagcatcggaaggagactct
gaatcagatgaagatgaggaagaacccaagctaaagtactcacggctatcggatttgaag
ccacctgtgttctcaaataatacggtatctacatttttggcgagcgaaacggttatagtc
tttgccacacattcagggataattcacatgtttaatcctgatatgagctctatcagatcg
tttcgtgcacaccgagcgtctatattgtctttatctactgatggcacatatctagcatcc
gggtctcttgatggtacagttgttatagtatctattatgaatcaaaaagatacatcctat
gctgacttcaaacgtccaattcacgcggtcgctttggatccaaattataagtccactcga
gcatatgtttcggcaggaacggcaggaagtgttattcatagcgaaaagaactggtttgga
agcagatcagatactgttctatatacctcggaagatccaataatatccttgaactgggtg
aataatctaattatatggatgaatgaggatggaattatattatattctacacacagaaag
tctatcttaaggcgtatagaccgccctgccaatgccccccgtgctgacctatacaaacca
cgaatctgctttccagactcgaatagaatcttcatagcatgggtggatcatatatggaat
atcaaaataaccacgggtagcgaagcaaagccaaagcccactataggagcaccatcgttt
ctttcatctagtgcgtcggttttgtcaccccatgctgacgaaattatagaggttgaaaat
gtacacaaactaccttggctcctaagcggtatattaccatttaaagacgcagtaatgata
ttggtgtacgctaaagcagatggtcaagaggcgtccgtttcctctcggaagcgaccaact
cccgatccacctgagttaaaactcatagactggttgacaggagaagaaacttatgcagat
gttctatctatgcgagggtatgagcgactaggcttagatgattatcacctgggtcatttt
catggaaatagatccatgcctgataaatattttattgtcagtggtacagacgcaatagtt
gctgaagagcggacgatgctggatagattgaactggcttgacgaaaagcatatgtacaag
aaaagttgggagatgagcgccagcttagtggatccgataagtcgaattgctataggaatc
aaacatgttgaatcattaatcgacaaagaaaaatggggcgaagcagctgcatttcttaaa
ataattctgtcacagccgtcaattgacaagtcagtactgagggaagagtgggatagatgg
ggatggatatttgtgaactccaatcatattagcgaattagctcaggttttgcctattgac
gatgaactagagatcaaagaggacttgtacgatagcatcattaactattgtctggacaat
gacagaaaaactcttgtcagtttgatttataactggcccccttcactttacgattacaat
ttgctaaagaatcaactagaggatcttattaacgaatctgagacctcaagctcgataaac
caaatgcgaatggccttagccgacctttacacaaggacaaatgacccattgtcagccctt
cagcacttgctagctctacatcatgccacggtgatagaccatatctcaaaatatcatttg
ctaccacagatccacgcaatgattccccaagtcttcatatataacctcacggatgaggag
ttagagaatgctccgttagaagtaatccgcgacaagacgaaacatacgattaatctgttt
gtggaaggaagacatcagcttgaacccaaggttattattcgtgcgttgtcgggtaataat
aagctggatgtcatgctatttttatatttggaagaactcactataaaggactcgtttatt
tctagagaatttgccaacctgcaaattaaactgtatgctgagtttgatcgcaggaagctg
atggggtttcttaatcgcaacagtcactataacctgacagaggcgctcaaagtttgcgat
caaaacaattatacaccagaactggtttatctgctgggaaaagtgggtcaacatcaaaga
gcattaagactgattatagaaaaaataggagatccagagcaggcactcgaatttgccaaa
tcacagaatgaccaggatctttggaatgatctgatccaccacagtttgaagcatccttta
ttcattaaagttctgcttgagaagggaaatggatctatagatcctgttcagcttattcgt
gacataccaccagggactagcatacctggtttgaaggaggctctacttaacctttttagg
gataaagagatgttacaatccttaaatatgggggctctggatatcatcaaggatgaagga
aagagctactcgcagcatctgaggtcgatacgattaaaaggggactctgttgactttaac
acagaacatccagaccttgatttatctgtaccatatgtgctaacgccaagtggagaaatc
aaaagtgaggaggaattgataggtcgtaagatcccatacataggcgatagtgatcaagaa
agtgaccgtcccaggtggtctgttgcatacaaagtgcgtcggttaaagcatatattggac
tatctgcacttttag
DBGET
integrated database retrieval system