Sugiyamaella lignohabitans: AWJ20_3654 Help Entry AWJ20_3654        CDS       T05270                                  Symbol COP1 Name (RefSeq) Cop1p   KO K05236   coatomer subunit alpha Organism slb  Sugiyamaella lignohabitans Brite KEGG Orthology (KO) [BR:slb00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:slb04131]     AWJ20_3654 (COP1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:slb04147]     AWJ20_3654 (COP1) Membrane trafficking [BR:slb04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     AWJ20_3654 (COP1) Exosome [BR:slb04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    AWJ20_3654 (COP1)   Exosomal proteins of bladder cancer cells    AWJ20_3654 (COP1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz TPR_COPA_B Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_SPT8 Plasmodium_HRP Motif Other DBs NCBI-GeneID:  30035700 NCBI-ProteinID:  XP_018738481 UniProt:  A0A170QZ78 LinkDB All DBs Position B:complement(4796477..4800025) Genome browser AA seq 1182 aa AA seqDB search MGTIIDRFEGHEGPVRGVDFHKTQPLFASCGDDYTINVWSLQTRKRLFTLTGHLDYVRTV FFHNDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPKEDLIVSASLDQTV RVWDISGLRKRHSAPSGALNTTNAFEDQLARANGPPQDIFGNTDAIVKYVLEGHDRGVNW ASFHPTLPLIVSGGDDRVLKIWRMSETKAWELDTCRGHLSNIMCCIFHPFQDLIISVSED KTIRTWDLNKRTPVQQFKREGDKFWYIAAHESINLFAAAHDSGVMVFKLERERPASTVYQ NSIYYINREKQVKFFDINSNNESLPLLSLKKIGSQWVPFRNLSYNPAERQILVTTKSADN QNIFELISLPKDASGAIEPSETSRGSGDQAVFISRNRFAVLLKSSQTIEIRDLGNSITKS VQCPISNVKDIVYGGPGLLLVLGAASVVLFDVQQKKTISEIPVSNIKYAVWSNDGQHLAL LGKHTITITTKNLETVSSLHETIRIKSATWDDTGVLIYSTLNHLKYSLLNGDNGILRTLQ NTLYMAKVKGNSVYCLARGGSIKVLKIDPTEYRFKKALVSKNFHEVLRLIKSSQLVGQSI IAYLQKKGYPEIALQFVQDAQTKFDLAIECGDLKEAFEQAKELGKPAAWKILGEEALAQG NHDIVEDIYQKQHDFDRLSFVYLATGNIGRLQKMEQIADHRNDTAARFQTSIFLNSVDSR IQLLRDAGLYPLAYSLAKSSGLTEVAREIIEESGVDESAIKISITDTSSDAITGVSHETH KSNWPLRKTSLSFFEQALLGKVEALSLEDEPEQKTNAETANGDFDEYEDELQDEDGWDLG AEDLGIEDVEETDEKVDSNIDITVGSSETELWLRNSPVAADHVAAGSFETAAQLLNRQVG IVNFAPLKKRFLEVYRGSKLYLPANDGLPPLTFYARRPDEKVLPFVHGYESLGETLQEAY KLVASGNQLQLAIETFREILQTIVVLSVPSEAEAKECQKLIEICKNYILAFSIELKRKSL PPTDVKRSLELVAYFTKPKLQKRHAHIPYMVAMKESFSKKNFASASFFASEYIKIMEGVD DDDSDRSVNERVRARNAKNIAQAKALKAKADASPLDAHEIDFDQYADFDICPSTLTPIYE GTSSERDPLTGAKYHVSERGKLCSITQLTSIGAPASGLRLFA NT seq 3549 nt NT seq  +upstreamnt  +downstreamnt atgggaaccatcatagacagatttgaaggccatgagggaccagttcgaggcgttgatttc cataaaacccaacccctatttgcgtcttgtggtgacgattatactatcaatgtctggagt ttgcaaaccagaaaacgcctcttcactttgactggccatttggactacgtgagaacagtg ttctttcacaatgatttgccttggatcatctcttgttcagatgaccaaactatccgtatt tggaactggcaaaatcgtcaggagattgcgtgcttgacaggtcataaccactatgttatg agcgctcagttccaccccaaggaagatttgatcgtttccgcatccctcgatcaaaccgtc cgtgtttgggatatttctgggttgcgaaaacgtcactccgctcctagtggcgctttgaat actaccaacgcttttgaggatcaacttgctagagccaatggcccaccacaagacattttc ggaaatactgatgcgattgtcaagtatgtattagaaggtcatgatcgaggtgttaattgg gcatctttccaccctactttgccattaatcgtgtctggtggtgatgacagagtcctcaaa atttggagaatgagtgaaaccaaagcctgggaattggatacttgtcgtggccatttgagt aatatcatgtgttgtattttccatccattccaagatttgattatttctgtcagtgaagac aagacaattcgtacttgggacttgaacaagcgaactcctgtgcaacagttcaagagggag ggcgataaattttggtatattgcagcccacgagtcaattaatctttttgctgccgctcat gatagcggtgtcatggttttcaagcttgaaagagagcgccctgcaagtacggtctaccaa aacagcatctactatatcaatagagagaagcaggttaaatttttcgacatcaatagcaat aatgagagtttgccattgctatctttaaaaaagattggcagtcaatgggttcctttcaga aacttgtcatataaccctgctgaaagacagatcttagtcaccaccaaatctgccgacaac caaaatatctttgagcttattagtttgcctaaggatgcttcgggagctattgaaccatct gagactagtcgtggatctggtgaccaggctgtattcatttctcgtaatagatttgccgtt ttgttgaaatcgagtcaaactattgagatacgtgatttgggtaactctattaccaagagt gtacaatgtcctatcagcaatgttaaagatattgtatatggaggtcctggtctgttgctt gttttaggtgctgcttctgtagttttgtttgacgttcaacagaagaagactatttctgaa atccctgtttcaaacatcaaatatgctgtatggtcgaatgatggtcagcatttggccttg ttgggcaagcacacaattacaattaccactaaaaacctagagactgtctcgtcgcttcac gaaactattcgtatcaagagtgctacttgggatgatactggagttctaatttattcaact ttgaaccatttgaagtatagtttattgaacggggacaatggtattttaaggactcttcaa aacacgctttacatggccaaggtcaaagggaactctgtatattgtcttgctcgtggtggt tctatcaaggttttgaaaattgatcctactgaataccgatttaagaaggctcttgtaagc aagaatttccatgaagtcctccgtcttatcaaatcatcccagcttgttggtcaaagtatc attgcttatttgcagaaaaagggatatccggaaattgctttacaatttgttcaggatgcg cagacaaagttcgatttggctattgaatgtggtgacttgaaggaggcttttgaacaagca aaagagctgggtaagcctgccgcctggaagatccttggtgaggaagcacttgcacaaggt aatcatgacattgtcgaagatatttaccaaaagcaacatgatttcgatcgcttgtcattt gtttaccttgccactggtaatattggaagattacagaagatggaacaaattgctgatcat cgtaatgacactgctgcccgattccagactagtattttcctcaactcagttgacagtcga attcaattgctccgcgacgcaggcttatatcctttagcatattcattggctaaaagcagt ggattgactgaagtcgctagagagattattgaggagtctggtgtcgacgagtcggctatc aaaatctcgatcactgatacttcgtctgacgctatcactggcgtttctcatgaaacacat aaatccaattggccactgcgtaagacttcgctttcgtttttcgaacaggctctcctcgga aaggttgaagcactgtctttggaagatgaacctgaacagaagactaatgcagagactgcc aatggcgatttcgatgaatatgaagatgaactccaagatgaagacggctgggacctcggt gctgaagatcttggcattgaagatgttgaagaaactgatgaaaaggttgacagtaacatt gacattactgttggttcgtctgaaacagaattgtggttgcgaaattctccagtggctgcc gaccatgtggccgctggttcatttgaaactgctgctcagcttctcaaccgccaagttggt attgtcaattttgctcctttgaaaaagaggtttttggaagtatatcgcggctcgaaattg tatttgcctgcaaacgatggccttcccccactgacattctatgctcgtagacccgatgag aaggttcttccctttgttcatggttatgagagtttaggagaaactctacaagaagcatat aagttggtggctagtggtaaccagcttcaactcgcaattgagacctttagggaaattctt cagacaattgtcgtgctatccgttccttctgaggcagaggctaaagagtgccaaaagctt attgaaatttgcaagaattatattcttgctttttcaatcgagcttaaaagaaaaagtctt cctcctactgatgtgaaacgaagtctcgaactggtggcttatttcactaagcctaagctt caaaagagacatgctcatattccttacatggttgcgatgaaagaatcattctcaaagaag aatttcgcttctgcctcattctttgcctccgagtacattaaaatcatggaaggcgtggat gacgatgattctgatagatctgtgaacgaacgggttagagccaggaatgccaagaacatt gctcaagccaaggctctcaaggctaaggcagatgcttcacctcttgatgcccatgagatt gactttgaccaatatgcggattttgacatttgtccatcgacattgactcctatttatgaa ggcacatccagtgaaagagaccccttgactggtgccaaataccatgtcagtgaaagaggt aagttgtgttctattacccagcttacctctatcggagcacctgcctcaggacttcgacta tttgcttga

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