Sugiyamaella lignohabitans: AWJ20_3667
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Entry
AWJ20_3667 CDS
T05270
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03030
DNA replication
slb03410
Base excision repair
slb03420
Nucleotide excision repair
slb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWJ20_3667 (RFC1)
03410 Base excision repair
AWJ20_3667 (RFC1)
03420 Nucleotide excision repair
AWJ20_3667 (RFC1)
03430 Mismatch repair
AWJ20_3667 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slb03032
]
AWJ20_3667 (RFC1)
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_3667 (RFC1)
DNA replication proteins [BR:
slb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AWJ20_3667 (RFC1)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AWJ20_3667 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_16
AAA_33
RuvB_N
BRCT_2
nSTAND3
AAA_5
AAA_assoc_2
AAA_30
AAA_14
Gp44_lid
AAA_28
Motif
Other DBs
NCBI-GeneID:
30035713
NCBI-ProteinID:
XP_018738493
UniProt:
A0A170QZK8
LinkDB
All DBs
Position
B:join(4826110..4826150,4826214..4828845)
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AA seq
890 aa
AA seq
DB search
MIEEDDDDDEIAVVEPPKTKRKTAAQKTEELEDVNVSEYFAGSRGRRSRTKKEDYITIDD
DDDDTEILELLSQKESKPKLPSQPAKQEGSRPETKSPRKASKKSSSPAQPAVEQKNAGFT
LSANEILAQIPDAILPEVDSTQKVNFYAKKAQAPQSSGELPEIAEAADNCLAGLTFVFTG
IMPNLSREQGQDLVKKYGGKVTTAPSRNTSCVVLGAEAGPKKIQKIIDLKIKAIDEQGFL
ELLAKMPANGGSGEAAQKAMEKKRQEKLKIEKEVERMSAEMAQKDSSSARAANRTNSGLA
NHKEAKPLTQPLQAESSSVMTEDEKLWTSKYAPNNLNQICGNKAAIDKLAKWLQNWRRNA
QNNFKGNFMDPNTFRAAILHGPPGIGKTTTAHLVAQLQGFDVIENNASDTRSKSLLQNQV
SRTLGNTSLLGTFARRGEVTNKSKKEVCLIMDEVDGMSAGDRGGVGAMAALCRTTNIPII
LICNERSLPKMRPFDKVTYDIAFRRPDASAIAPRILAIAAREGLKLDEGVVRQLVESTRS
DIRQIINLLSTYSTTNKNMDYDTSKTISKQWEKRVVLKPFDIVGKFLSAATFAPSNNISL
NDKIELYFNDHDFAPLMVQENYLNSVPSKSQSTPGGALALIAEAAESISDGDLVDRMIHG
SQQQWSLMPLHGALSCVRPSYFAAGQATGRFNFAGFLGNNSKAGKYNRLLQELQSHARLK
LWGDKLEMRMQYLPFLTYKLIQPLQESGADGIADVIATLDEYYLTKEDWDVIMELGVGPL
SSEPKAKALPTTVKSGFTRKYNAMDHPMPYMKSAGMTAAEARVIPKLEKPDFEDVIEEDI
EAPEEDEKPLDDSEELAKNKYINIPKSKGKAAKGKSKASTKAPAKSRAKK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggaagacgacgatgatgatgagatagctgttgtagagccacctaaaacaaaa
cgaaagaccgcagctcaaaagacggaggaactggaagatgtgaatgtctccgaatatttc
gcaggcagcaggggcagaaggtctaggactaagaaagaggattacataacaattgatgat
gatgacgatgatactgagatcctggagcttttaagccaaaaggaatccaaaccaaagtta
ccttctcagccagcaaagcaggagggatcacggcctgagacgaaatcccccagaaaagct
tccaaaaagtcatcgagcccagctcaaccagctgtggaacagaaaaacgcgggcttcacg
ctatccgccaacgaaattttggcacaaataccagatgctattttgcccgaagtcgacagt
actcaaaaagtcaatttctatgccaagaaggcgcaagctcctcaatcttctggtgagcta
cctgaaatcgctgaagcagcagacaattgtcttgcaggactcactttcgtattcacagga
atcatgccaaatctttcacgtgagcagggtcaagatttggttaaaaaatatggtggaaag
gttacaactgcgccgtcccgtaacacttcatgtgttgttttgggagccgaagcaggccct
aaaaagattcaaaaaatcatagatttgaaaatcaaagccatcgatgagcagggatttttg
gaattactggcaaaaatgccagccaacggcggatcaggagaagcagctcaaaaggctatg
gagaaaaagagacaagagaagctgaaaatcgagaaggaagttgaacgaatgagtgcagaa
atggcacaaaaggatagctcttcagcacgagctgcgaatagaacaaacagtggcttggct
aaccacaaagaagccaagcctcttactcagccacttcaggctgaatcgtctagtgtcatg
actgaagatgaaaagctctggacctcaaaatatgccccgaacaatttgaatcagatctgt
ggaaacaaagcggctattgataagctggcgaaatggctgcagaactggagaagaaatgct
caaaacaactttaaaggaaatttcatggatcccaacacttttagagcggcaattcttcat
ggcccacctggaattggcaaaacaactaccgcgcatttggttgctcagctgcaaggtttt
gatgtcattgaaaataatgcctcagatacccgatcgaaatctttgttacaaaatcaagta
agccggacccttggtaatacttctctactgggcacgtttgccagacgaggtgaagttacg
aataaatctaagaaggaagtttgtctcatcatggatgaagtagatggtatgtctgcaggt
gatcgaggtggtgttggtgctatggccgccctctgcagaacaactaatattccaatcatt
cttatttgcaatgagcggtcattgcctaagatgagaccctttgacaaagtcacttacgac
atcgcatttcgaagacctgacgccagtgcaattgctcctcgaattcttgcaattgctgcc
cgtgaaggtttgaagttagacgagggtgttgttagacagctggttgaatcgaccagatct
gatatccgacaaataatcaatcttttgtcgacatactccaccaccaataagaacatggac
tatgatacaagtaagaccatttccaagcaatgggagaaacgtgttgtcttgaaaccattt
gatattgtgggaaaattcctcagtgcagccacatttgcacccagcaacaacatatctcta
aatgataaaattgagttgtacttcaatgaccatgactttgccccactgatggttcaagag
aactacctcaactctgttccgtctaagtctcaaagtactcctggtggagctctggccctt
atcgctgaagcagcagagtctatctcggatggtgatcttgttgacagaatgattcatgga
tcgcaacaacaatggtccctgatgccactacatggtgccttgtcttgtgtgcgaccaagc
tattttgctgcagggcaagcgactggacggtttaatttcgctgggtttcttggtaacaac
tcaaaggcagggaagtacaatcgactccttcaagaacttcaatctcacgccagactaaaa
ctatggggagacaaattggaaatgagaatgcaatatttaccgtttttgacctataaatta
attcagccgctacaagaatctggagcagacggtatagctgatgtcattgctactcttgat
gaatattatctcacaaaggaagactgggatgttattatggaacttggcgtggggccctta
agcagtgaaccaaaagcaaaggctttgccaacaacagttaaatccggtttcactaggaag
tacaatgctatggatcatccgatgccatatatgaagtcagctggtatgactgctgctgaa
gctagagttatccccaagctagaaaagcctgattttgaggatgtgatcgaagaagacatc
gaagctccagaagaagatgaaaagccccttgatgatagtgaggagttagccaagaataag
tatattaacatccctaaatctaagggtaaagcagctaaaggaaagtctaaggcttctaca
aaggcaccagcaaaatctcgcgccaaaaaatag
DBGET
integrated database retrieval system
