Sugiyamaella lignohabitans: AWJ20_3669
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Entry
AWJ20_3669 CDS
T05270
Symbol
STO1
Name
(RefSeq) Sto1p
KO
K12882
nuclear cap-binding protein subunit 1
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
slb03015
mRNA surveillance pathway
slb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_3669 (STO1)
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_3669 (STO1)
03015 mRNA surveillance pathway
AWJ20_3669 (STO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3669 (STO1)
03041 Spliceosome [BR:
slb03041
]
AWJ20_3669 (STO1)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
AWJ20_3669 (STO1)
Spliceosome [BR:
slb03041
]
Common components
Common spliceosomal components
Cap binding complex
AWJ20_3669 (STO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Ins_allergen_rp
Motif
Other DBs
NCBI-GeneID:
30035715
NCBI-ProteinID:
XP_018738495
UniProt:
A0A170QZN0
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All DBs
Position
B:4829503..4832043
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AA seq
846 aa
AA seq
DB search
MYNKYSSYDSRPSPGGNKRRRDDDESDFQRGRRAPPHIQKLIQLRRAIVEIGEPSKFKIS
EEIQKLGKDLGACDTDTRNGVLNTILAVVNEQPHKIPLLSGAVQIANAESEILGQVVIEL
AQSEIQKALNGGELNKVKLLIRFIASLAPIIEGDGVTEILSALLSIACDLQNEAINSDKG
SKKSLVAEELYVAVLLALPFYVAADPLNIPYANEILKTSTERFQIGSFQAMNLIVPFSNG
TSTIDAPYVAQEFVRLVKHALENIHSEYSDQWKTSNLLDIGSIVKESLNQPTESEDDQQA
KSVKKHLFAAVHLPTLDTFKSFQPRFPYPRIYFQAYLPSVFETVPPPNSLEGVILRDIAT
DIITAMDFNRKEVTRQLITLDLFFADGCFTEPGISFDRLEKVRESGEEKSTWKVEDVALE
AVLQHIFNLPYQSHAPAYYYTILIEACVMAPQAIAPVFGRAIRFIYKNLESLDVELVFRF
LDWFGVHLSNFSFTWKWKEWEADLKLTENHPKQVFIRQLIEKELRLSYPERLRDTLPEEF
KPLLRLIPSEPIFKYYEADSKYETEVRQLVAALRSKKSDEIQNAINVLREKALGESVGEH
ATELDRTLIDILVTTICYLGNRSLSHSKNWVSQTAEVLKGFITSSEDELTAIKSIVSYWT
DLPHVGKWVMRHFVEANVLTDSSVTDYLLQGNEGLAPIVSCDGWEQFSWVMDKYDSSDDV
AIQKTSRIISKLGLLLDQNSDDSDESSQWATWWYRGVAKSLFRKYPKLFTKARTQTGTVD
KFLEDLFPALDELAELSSKSDLASTSSVVEINGEDQTLADGKELEPDMAKSNDNRPPEEP
EPMDKD
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtataataagtattcttcgtacgattcaagaccaagcccgggagggaataagaggaga
agggatgatgatgaaagtgatttccagagaggtcgacgggcccctccacacattcagaaa
ctcattcaattgaggagagcaattgttgaaattggagaaccatccaaatttaaaatctcc
gaggaaattcagaaattaggaaaagatttgggtgcttgcgataccgatacgcgcaatggt
gtgctcaatacaattctggctgtcgtaaatgaacaaccacataagatcccactattgtct
ggtgcagttcaaatcgcgaacgcagaaagcgagattctcgggcaagttgtgatagaattg
gctcagagtgaaatccagaaagccctcaatggaggtgaactcaataaagtaaaactcctc
attcgctttattgcttcccttgctcctataattgagggtgatggggtcaccgagattctg
agtgcccttcttagcatagcatgcgacctacagaacgaggcaattaattcggacaaggga
agtaaaaagtccctagttgccgaggaattgtatgtggctgtattacttgcacttccattt
tacgttgctgctgacccattgaatatcccctacgctaatgagatcttaaagacctcaacg
gagcgatttcagataggatctttccaggcaatgaacctgatagtacctttttcaaacgga
acatccactattgatgcaccttatgtagcccaagagtttgtgcgtttagtcaagcatgcg
ctggagaacatacatagtgaatattctgatcaatggaaaacatccaatttacttgatatt
gggtcaattgttaaagaatctctcaatcagcctactgagagtgaagacgaccagcaggct
aaatctgtaaagaaacatctttttgcggcggttcacctgccaacactagacacattcaag
tccttccaaccacgattcccataccccagaatctattttcaagcttacttgccgtcagtc
ttcgaaacagtaccgccccccaatagtttagagggtgtcattcttagagacattgccacc
gatattattacagctatggattttaacagaaaggaagtcactcgacagttgattactctt
gatctattttttgctgacgggtgtttcacagaaccgggtatatctttcgaccgccttgaa
aaggttcgggagagtggtgaagagaaatcaacctggaaagtcgaagacgtggccctggaa
gccgttttacagcacatttttaatttaccttaccaaagccacgcacctgcttattattat
actattcttatcgaggcatgtgtaatggcccctcaagcaattgcccctgtgtttggaagg
gcaattcggtttatatataaaaatttggaatcactagatgttgagctagtatttagattc
cttgattggtttggcgtacatttgagtaattttagttttacttggaaatggaaagagtgg
gaggctgatctcaaactgacagagaaccatcccaagcaagtatttattcggcagctcatt
gaaaaggagctacgactaagctatccggaaagacttcgagatacactaccagaggaattc
aagccattattaagactaattcctagtgaacctattttcaaatattatgaagccgacagc
aagtacgagactgaggttcgtcaattagttgctgcattacgatcaaaaaaatccgacgaa
atccaaaatgcgattaacgtgttgcgggaaaaggctctcggtgagagtgtcggggaacat
gcaacagagcttgatcgcactttaatcgatatcttagttacaactatatgctaccttgga
aatcgatctctaagccattccaaaaactgggtttctcagactgctgaggttttgaagggc
tttatcacatcttctgaagacgagcttactgctattaaaagcattgtttcatattggacg
gatcttcctcatgttggcaagtgggttatgagacattttgtcgaggcaaatgtattaact
gattcgtcagttactgactatttattgcaaggtaacgagggcctggctcccatagtaagc
tgtgatggatgggagcaattttcctgggttatggacaagtacgattcttcggatgatgtt
gctattcaaaagacctcgaggattataagtaagctagggttactattagatcaaaatagt
gatgatagtgatgaatcatcacaatgggcaacctggtggtatagaggtgttgcaaaatcc
ttatttagaaagtatcccaaactgtttactaaagctagaactcaaacgggcacggttgat
aaatttttggaagatctcttccctgctttggacgagctagcggagttgagcagcaaaagt
gatttggcttccacgtcttccgtcgtagaaattaatggcgaagatcaaacattagctgac
gggaaggaactcgaacctgatatggctaagtctaacgacaataggccgccagaagagccg
gagccgatggataaagactaa
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