Sugiyamaella lignohabitans: AWJ20_373
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Entry
AWJ20_373 CDS
T05270
Symbol
NPL3
Name
(RefSeq) mRNA-binding protein NPL3
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AWJ20_373 (NPL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_373 (NPL3)
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_373 (NPL3)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
AWJ20_373 (NPL3)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AWJ20_373 (NPL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Calcipressin
RRM_3
Motif
Other DBs
NCBI-GeneID:
30035783
NCBI-ProteinID:
XP_018734612
UniProt:
A0A167CUY3
LinkDB
All DBs
Position
A:1207359..1208426
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AA seq
355 aa
AA seq
DB search
MSELDLARLFVRPVGPDVSKEELEDVFRAYGEVSEVKLMRGYAFVEFGNEEEAKAARDGL
NETDFHGQNFQIEYAKPKPTPRERDEYNSAKFGGGKRYRVLVSNLGEDASWQDLKDFARD
NNIQGVNYADVSRARDGTGVIDFVSQADLEDGLSKLDGLEFKGSTISASEDPNPPPLPSG
PPRFRDSYGRGDRGGRYGDRRGGDRDYDRRGGDRGYDRYDRRGGDRGYDRGDRYDRRGGD
RDFDRRDRGGDRDFDRRDRGGDRDYDRRDRGGRDFDRRDRGGRDFERRDRGGRDYERRDR
GSDRRESRGGRDDDETYTRQRSQSPPRYANGARERDDDVPVHDAEPAHDDAEGTW
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactggatctcgcgagattgtttgtccgaccagttggtcccgacgtgtctaag
gaggagttggaagatgtttttagagcttatggagaagtttctgaggtgaagcttatgcgt
ggatacgcttttgtggagtttggtaacgaggaagaggccaaggccgctcgtgacggactt
aatgaaacagatttccatggccagaacttccaaatcgagtatgccaagcctaagccaact
ccccgtgaacgtgacgagtacaacagtgccaaatttggcggtggtaagcgttatagagtt
cttgtcagtaaccttggcgaggacgcttcatggcaggatttgaaggatttcgctagagat
aataatattcagggagtcaattatgccgatgtttctcgtgctagagacggtactggtgtc
attgactttgtttctcaggccgatttggaagatggtttgagtaaattagacggtcttgag
tttaagggctcgaccatttctgcttctgaagaccccaatcctcctcctcttccttcagga
cctcctcgttttagagatagttatggtcgtggtgaccgtggtggaagatatggcgataga
cgtggtggtgaccgtgattacgaccgtcgtggtggtgaccgtggttatgaccgttatgac
cgtcgtggtggagaccgtggatatgatcgtggtgaccgttatgaccgtcgtggtggagac
cgtgatttcgaccgtcgtgatagaggtggtgaccgtgatttcgatcgtcgtgacagaggc
ggtgaccgcgattatgaccgtcgtgacagaggaggtcgtgattttgaccgtcgtgacaga
ggtggccgtgattttgagcgtcgtgaccgtggtggccgtgattatgaacgtcgggaccgt
ggttctgatcgtcgtgaaagccgtggtggacgtgatgatgatgagacatataccagacaa
cgatctcaatcgcctcctcgttatgctaatggagcccgtgagcgtgatgacgacgtgcct
gttcacgatgccgagcctgctcacgacgacgctgagggtacctggtaa
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