Sugiyamaella lignohabitans: AWJ20_3857
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Entry
AWJ20_3857 CDS
T05270
Symbol
NSP1
Name
(RefSeq) FG-nucleoporin NSP1
KO
K14306
nuclear pore complex protein Nup62
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_3857 (NSP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3857 (NSP1)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AWJ20_3857 (NSP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ENOX1
TMP_N
ParB
Motif
Other DBs
NCBI-GeneID:
30035924
NCBI-ProteinID:
XP_018733538
UniProt:
A0A161HF51
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Position
C:complement(join(473749..475815,476488..476502))
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AA seq
693 aa
AA seq
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MLRQTPFAFGSSTTPAGNPSGGNAFSFGNASNNTASGTTASTGTGLFGTNTTGTGLFGSK
PAATTTAPSGTGLFGATAGSTNSGTGSTGLFGGASTGTAAKPLFGAATSTTPATSGTGLF
GASTNNNASSTPASGTPSLFGSSTTGTSNASKPLFGSVATSTTSSEASKPLFGAATATSQ
PAPSLFGGAASSTTTNTTSSGLTKPLFGTAASTGTSTEPAKPLFGAATTTSATTEPAKPL
FGAATTSTSSSQPAKPLFGAATTSTSSSQPAKPLFGAAATGTSSEPAKPLFGAATTGTSS
EPAKPLFGAAATGASTEPAKPLFGAAASTATTSAEPAKPLFGAASTSTSTPLFGAKPATS
EPAKPLFGAATTNTATSSKPAETAKPLFGAATTTSTSTTEPAKPLFGAPAATSSSTTNTT
SSEPAKPLFGGATSTAKTTEPAKPLFGAAPTTTSTTTATTSAPTTSGTKAASASSTTAPA
TKPEEIAPSLYLKNKSFEDIIAKWTSTLAQNTADFQSQAISIAGWDRVLVENGERISEVF
SEVVLAEQNQGKVDQMLQYISRQQDDLETLLEGYEKQASHFLSDMAGPEGMQPVDQEREK
AYRVAEDLNEKLESMDSNLASVIEEINKVSSDLTRAKDDDALTQIVKILNSHLSSLRWID
SNTSLLQEKLDKIHTLESQTRDHLNESQRFGAY
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccagactcccttcgcatttgggtcttcgaccacaccagcaggcaatccaagt
ggaggaaatgccttcagttttggcaatgcatctaataacactgcctctggcacaactgct
tcgactggaactggtctttttggtaccaatactaccggaactggcctgtttggtagcaaa
ccagctgcaacgactactgcaccttctggtactggtttgtttggtgctacagctggaagt
actaacagtggtactggttctacaggattatttggcggtgcatcgactggaactgctgcc
aagccactttttggagctgctacttctacaaccccagctacatctggaactggtttgttt
ggtgcttcgactaataataatgccagttcgactccagcttcgggaactccctcgttgttt
ggcagctcgacaactggtactagtaatgccagtaagcctctttttggctctgtagccaca
tcaacaacaagttcagaagcatctaaaccattatttggagctgcaactgccacttcccaa
ccagctccttcattgtttggtggtgctgctagttcaaccaccacaaatactactagtagt
ggccttactaaaccactatttggaactgctgctagtactggcacatctactgaacctgct
aagccattatttggagctgctacaaccacctctgccactacagagccagctaagccattg
ttcggagctgccactacttcgacctcctcgagccaaccagccaagccattgttcggagct
gccactacttcgacctcctcgagccaaccagccaagccattgtttggtgctgctgccact
ggtacctcaagtgaaccagccaaaccattgtttggtgctgcgaccactggaactagtagt
gagcctgccaagcccttatttggtgctgctgccactggcgcatcaaccgagccagctaag
ccattatttggtgctgctgctagcactgccacaacttctgctgagcctgccaaacctctc
tttggagctgctagtaccagtactagcacacctctgtttggagccaaacctgctacctca
gaaccagcaaagcccttatttggtgctgccaccactaatactgctacctcatccaaacct
gctgaaactgctaaaccattgtttggtgctgctactactaccagcacaagtactaccgag
cctgctaagcctttgttcggtgctcctgcagctacttcaagctcgactaccaatacaact
tcatccgaaccagctaaaccactatttggaggtgctacttcaaccgccaaaactacagag
ccagccaagccattatttggagctgctcctactactacctcaactactactgccacaaca
tctgctcctaccacatcaggcactaaagctgcttctgcatcatctactactgctccggct
actaaaccagaagagattgctccttccctttaccttaaaaacaagtcctttgaagatata
attgccaagtggacaagtactttagcacaaaacactgcggactttcaatcacaggcaatt
tcaattgccggttgggaccgtgtcttagttgagaatggagaaagaatttcagaggtgttt
tcggaagtagttttggcagaacagaaccaaggtaaggttgatcagatgcttcaatacatt
tcaagacagcaagatgacctagagactcttttggagggttatgagaagcaagcctcgcac
ttcttgtcggatatggctggtcctgaaggaatgcaacctgttgatcaggaaagagagaaa
gcttatcgtgtagcagaagaccttaatgaaaagctcgagagcatggatagcaatttggcc
agtgtcattgaagaaatcaacaaggtttcaagcgaccttacccgtgccaaggatgacgat
gctctcacccaaattgtcaagattctcaattcacacttgtccagtttacgatggatcgat
tccaatacatcgcttctgcaagaaaagctagacaagatccatactctcgaatcgcaaacc
cgagaccatcttaatgagagccaacgttttggcgcttactag
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