Sugiyamaella lignohabitans: AWJ20_3910
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Entry
AWJ20_3910 CDS
T05270
Symbol
NUP85
Name
(RefSeq) Nup85p
KO
K14304
nuclear pore complex protein Nup85
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_3910 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_3910 (NUP85)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_3910 (NUP85)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AWJ20_3910 (NUP85)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AWJ20_3910 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
30035984
NCBI-ProteinID:
XP_018733589
UniProt:
A0A167C1T0
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All DBs
Position
C:665497..668793
Genome browser
AA seq
1098 aa
AA seq
DB search
MDYNRLFQNKDRDAGDQESSSEPKPFSFNLGGDSTTGNALQNKPSGVGFNGLFSKQPENS
YIDAQPLETNKLPDIGMVEHSIFGASATGAPPSFGAQSTETKSLFSNSSSSGSSQPPLFG
GFGRSNNDQVSREQSSVVTNSSTQGNSIFGISTNNNNSSSSQTPSLFNKNTGPTFTSTSL
FGSGSHEASVGSSGFNIQKPLSFSATSSATSESTQAPKSEKTEDLSSTLAGKNEGFKFGS
GEKSGNSWSFSSTKANETTAGQKNDSRIGTGNTNIFNSISTGTNDSIFGQNSTAITNTGS
VALPAFNLKGSASQSASDNISSQTARPSLFASSNSNEESRFGATDSGAPLAVPSIGLDLL
SQVTSLDTNYPGRDTIESIDSGFLDYEPNMDSNNLETSQPSVSEFSTAPEFTLEDAPIQN
GGLEHWHNMNRTLKFTISTVGNGGVAWIDRRNRDKQSIQNEPTGDIIQEEKKLFSANIPS
QIPNSPGYIQFVKDCYNIVKECQDEIESDSSGPVNVVCKHYFNLLYNRILESLNYVEDDT
QMMDVSFIVYCFLVVYFEANVKSESEPFAKAFSKWANTVDEGSSPEDAAEIMRMSPPTKH
PLYWDFVHDRASRGLLEVCASTLQEANSKEMAADVRESIHYATQLLRSYPNEEGSEYKFH
QWKRQCNIAHGHAQDIADPALRIQLVRLFDILRGHKATILEQNSNSWFVALSALVMFNDP
SRSRLKEYFDIVQAEIPIDSLLKWESGCAAVISGDILVAIQKLESLDSCVATAVAQLCQM
RGLLDDYGIVRINNEPSVRDWLVLSHGQNCITSEIPELEKIGINILVDLDIPQSRATLAE
YLPRYVAHDVEELEWVLSTANELGLHDTERQIHRIAARNYAFNGCFLEAFFELDKAKDAS
ALQALSWQLFEDSLVFNEPAAEDLTIQAVLPNSGVELSPLVHEIMAPFAVLNEAFELLRS
EKYIQAGGRILALLRFPYLPGRFVAPLLSMIISLLSHNKQPRSFTSTDLVLVMDTLDMWE
KQATNTKDHVDTSGYKEGLAIIERAVHTAKTEETLPLKNNDWRALLLSIPVEKIPDFIIS
TGRIVLAREVSRAYLSGL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggattataaccgactctttcagaataaggatagagatgctggtgatcaggaatcttct
tctgagccaaaaccgttctctttcaatttgggcggtgacagtactaccggcaatgctctc
cagaacaaaccatctggtgttggatttaatggtttattttcaaaacagccagaaaactca
tatattgacgcgcaaccactagaaacaaacaaattacctgatatcggtatggtggaacat
tctatatttggtgcatcggcaaccggagccccgccttcctttggtgctcagagtactgag
accaagtccttattcagtaattcaagcagtagcgggagctctcaaccgcctttatttggt
ggcttcggtagatctaataatgaccaagtttctcgagagcaatcctctgttgtcaccaat
agcagcactcagggcaattccatatttggaatttcaacgaataataataactcttcatct
tcgcagacacccagcttatttaataaaaatactgggccaacttttacctcaacctctttg
tttggaagtgggagccacgaggcaagtgtcggatcctcagggtttaatattcagaaaccc
ttatcattttcagctacgagttctgcaacgtcggaatctactcaggcacctaaaagcgag
aagacggaggatttgtctagtacactagcgggtaaaaatgaaggttttaaattcggttct
ggtgagaaatctggtaattcttggtccttttctagcactaaggcaaatgagactacagct
ggtcagaaaaatgatagtcgaattggcaccggcaataccaacatttttaactctatttca
acaggcacgaacgattccatatttggacaaaactcgactgcaataactaacactggaagt
gtcgctcttcctgcctttaatttaaagggctctgcgtcgcaatcggcaagtgacaatatt
tctagtcagacagcacgcccttctttattcgctagttcgaatagcaatgaagaaagcaga
tttggggcaacagactcaggtgcacccttagctgtgccttcgattggtcttgatctttta
agtcaagtaacttcgttagatacaaattacccaggtagagatacaatagaatctatcgat
tctggctttttagactacgagcctaatatggattctaacaacttggagacatcacagcct
agtgtatcagaattttcaacggcacctgagttcactttagaagatgctcctattcaaaat
ggaggattggaacattggcacaatatgaatagaacattgaagtttacaattagtactgtt
ggcaatgggggtgtcgcttggattgaccgtcgcaatagggataaacagagtattcagaat
gagccaactggagatataatacaggaggaaaaaaaactgttcagtgctaatattccttcg
cagattccaaattctccgggatacattcagtttgttaaagactgttacaatattgtgaag
gaatgtcaagatgagatcgaatcagatagtagtggcccggttaatgtcgtttgcaaacat
tatttcaaccttctttacaatagaatcctggagtcactcaattatgtagaagatgatacg
cagatgatggatgtgtcgttcattgtttattgtttcttggtggtttatttcgaagcaaac
gtgaagagcgaatcagagccctttgccaaggcattctcaaagtgggctaatacagtagat
gagggatcctcacccgaagatgcagctgaaataatgagaatgtctccacctacaaagcat
cccttgtactgggactttgtgcatgacagagccagccgtggactacttgaagtttgtgct
agtaccttgcaagaagcaaattcaaaagaaatggcagccgatgtccgtgagtccatccac
tatgccacccaattgcttcgttcgtatccaaatgaagaaggctctgagtataagtttcac
cagtggaaaagacaatgtaatattgcccacggccatgcgcaggacatagcagatccagca
ttgcgcatccaattagtccggctcttcgacattctcagaggacataaggcaacaattctg
gagcagaactccaatagttggttcgtagctctttcagctttggttatgtttaatgatcca
tcaaggagccgcctgaaggagtattttgacattgtacaggcggagattcctatcgatagt
ctattaaaatgggaaagcggttgtgcggcggttatttcaggagatattctggttgctatt
caaaaactggaatcacttgatagttgtgtagcgacagctgttgcccagctgtgccaaatg
cgaggattactagatgattatggtattgttcggatcaataatgagccctcagttcgggac
tggctagttttgagtcacggccagaattgcattactagcgagatacctgagttggaaaag
attggtattaacatattggtagatttggatattcctcaatctcgggctactcttgccgag
tatcttccaagatacgtagcacatgacgtagaagagctagagtgggtactttctactgct
aatgagttaggattacacgatacggagcgccaaatccaccgcatagctgcccgtaactac
gcttttaatggatgcttccttgaggctttctttgagctcgataaggctaaagatgcatca
gccctccaagctctgagttggcaacttttcgaagactcattagttttcaacgagccagct
gccgaagatcttactatacaggcagttctgccaaatagcggagtcgaactgtctccccta
gttcatgagatcatggcaccatttgcagttcttaatgaagcatttgagctccttcgaagt
gaaaaatatatacaagctggtggccggattcttgctctattacgatttccatatctccct
ggccggtttgttgcaccacttctttcgatgatcatttctcttctgtctcacaataaacag
ccccgaagtttcaccagtactgatcttgttctggtaatggatacgttggatatgtgggaa
aaacaagctacaaataccaaggatcatgttgatacgagtggttataaagagggtttggcc
attattgaaagggctgttcacacggctaagactgaagagaccttaccattgaagaataat
gattggcgggctcttcttctttccattcctgttgaaaaaattccagactttattatcagt
actggtagaatagtgcttgcacgtgaagtatctcgtgcttatttatcaggactctag
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