Sugiyamaella lignohabitans: AWJ20_3963
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Entry
AWJ20_3963 CDS
T05270
Symbol
POL2
Name
(RefSeq) DNA polymerase epsilon catalytic subunit
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03030
DNA replication
slb03410
Base excision repair
slb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWJ20_3963 (POL2)
03410 Base excision repair
AWJ20_3963 (POL2)
03420 Nucleotide excision repair
AWJ20_3963 (POL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slb03032
]
AWJ20_3963 (POL2)
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_3963 (POL2)
Enzymes [BR:
slb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWJ20_3963 (POL2)
DNA replication proteins [BR:
slb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
AWJ20_3963 (POL2)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
AWJ20_3963 (POL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
zf_DPOE_2
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
NAPRTase_C
Spectrin_2
DUF6431
Motif
Other DBs
NCBI-GeneID:
30036042
NCBI-ProteinID:
XP_018733639
UniProt:
A0A167C349
LinkDB
All DBs
Position
C:814621..820464
Genome browser
AA seq
1947 aa
AA seq
DB search
MAYDIETTKAPLKFPDSAVDKIMMISYMIDGEGFLITNREIVSKDIEDFEYTPKPEYKGV
FTIFNEETEKELLVRFFDHIKEEKPTVIATFNGDFFDWPFVEARAAFHGIDMYQEIGFQK
DAEEEYKSTHCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIEVDPEMMTPYAIEQ
PQVMAEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYK
NGILLPHKHKDPAERFYDGHLIESETYVGGHVESLEAGVFRSDIPTDFNIDTTAIDELLK
DLDSALNFTIEVEAKKKVSDITNYDEVKADVTAALIKLKTDPKRHERPSIYHVDVASMYP
NIMTTNRLQPDSMISEEDCASCDFNRPGKTCDRRLPWAWRGEFFPTKKDEYLMIRNSLQN
ERFPGRFPDSPSRDFKDLSSTEQAAAIKKRITEYSKKVYHKVKVTETIEREAIICQRENP
FYVNTVRDFRDRRYEFKGLQKVWKRKVDDIPASDVSGREEAKKMIVLYDSLQLAHKVILN
SFYGYVMRKGSRWYSMEMAGVTCLTGATIIQMARSLVERIGRPLELDTDGIWCILPKTFP
EDFTFNLTDGKKLPISYPCVMLNHLVHAKFTNHQYQILEDSTTLRYKTISDNSIFFEVDG
PYKAMILPTSKEEDKNLKKRYAVFNPDGSLAELKGFEVKRRGELRLIKAFQSQVFSVFLK
GTTLTECYAEVGKVANSWLDILDSKGKTLEEDDLIDLISENRSMSKTLQEYEGMKSTSIC
TARRLAEFLGSQMVKDKGLACKYIISKKPLGAAITDRAVPVAIFSAETSVKSHYLKKWLK
DPGLDDYDPRSILDWDYYRERLASTIQKMVTIPAALQQVSNPVSRIQHPDWLLKRISTKN
DKLKQKKLSSFFSTGSKPMTDASNKVNQLSGSILNNDRIHDIEDLTLGDARVTTAKIGKV
AMKRKGNNSEAQSVALQEQFVSLSLEMPSPEEDYGEWLRYHKKKWAIQKQSRQNRQHLFG
DSSRKIGVSGLIMQQTETAYSNSWQFLQFCPSEKGGEARAFVYINDKIQTIRINVGRRLY
VNFRRATPSVYELPNCKVEKVNHTLPNGRTSDHLYRLHMSESAYETEMAKADSVLKHANI
EGIYESQLGAEDRSLLELGCTTILDNSKPGLLGAGLEKGFSLEWLKPYNEVYLLNSKLNY
LFLCHLVSHELQVFALVPSWSSQAFVFVLRPSRSAQGLPNLSKSYEEFLKESNVSMDPGS
PIFNYQDQLVFEESYFDDISKLYKKLGQAITKLHSENATKAILCIQSPQAGRLKKLLRPI
NDFPNIEIRSSTMAIPQIGWQTAAAKRICKSYLSLRSWIGLYCRLSRYSDVPIGNLKGDD
IRYLIDVIYARRLQQSNIVLWWSNSPIPDNGGSEKDSILPLIDPVSLPTVNNSGVYSKIC
IDLQVRNLSVNTILTAAIINEAEGADLAGSIVQGDGSSNSTPFVENAFSTPALAVLSNLV
KEWWNQALANDETADDMVNCFISWVSSSNSFLYDQTLYYHVQNLSKKAFIQLVREFRKAG
SQLVFADQKRFVLMTPKKILENTYSYANFLIKTIRSKPLFNFLDISLTEYWEVLVWMDDV
NFCGKSCKSLSASGKDTVQTFFNWHIGRFLPPLLQTEFEESVLSFMEKYCDYRDQFQKKQ
QETLGVRQTQISSTALQRVSTDEDNNDSEIDNHFANGIFEAIRPQLVKRVKQLLKIYLDG
KSNPDIAVQFEFPVLAGSRLQLSNPITQFVKSLCAVYGLSKELNLESRTLRRNLLSILGI
KEFTEEASFKNPSASLIIDSVVCENCYFVCNLDLCRQDDLVRKDTVGNTVYYSWACENCG
KDYNRIVLEERLIQNIQKLVTSYQIQDLKCEKCKKIKSDELSVRCECSGNWVETIPSSHV
LKSIETYDRVAQFYELKFLQDVTSHLI
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgatatcgagacaacgaaggctccattaaagtttccagattcagcagtggat
aagatcatgatgatttcatatatgattgacggagaggggtttttgatcaccaacagagaa
attgtatctaaagatattgaagattttgaatatacccccaagcctgaatacaaaggtgtt
ttcacaatctttaatgaagagacagagaaagaactgttggttagattctttgatcatatc
aaagaagagaaacctacagtaattgcgacattcaatggtgattttttcgattggcccttt
gttgaagctcgagctgctttccatgggatcgacatgtatcaagaaataggttttcaaaag
gacgccgaagaagagtacaaatccactcactgtgtgcatatggactgctttagatgggtt
aaacgtgatagttacctgcctcaaggtagtcagggtctaaaagccgttaccacagccaag
ctaggatacaatccaatagaggttgatccagaaatgatgactccgtatgctattgagcag
ccacaggtcatggcagaatactctgtatcagatgctgttgccacctattacctgtatatg
aaatatgtgcaccccttcattttctccctttgcactattattccactaaatccagatgaa
gtgttacgaaagggaacaggtactctttgcgaaatgttactgatggtgcaggcttataag
aatggcatcttgttgccccacaaacacaaagatccggcagaaaggttttacgatggtcat
ttgattgagagtgagacgtatgtgggcggtcacgtagagtcactggaagcaggagtattt
cgaagtgatattcctacagattttaatattgataccacagctatcgatgaacttctcaag
gatttggactcagctttaaatttcacgattgaggtggaggccaaaaaaaaggtcagcgat
ataacgaattatgatgaagtcaaggcagatgttactgcagctttaataaagctcaaaaca
gatccaaaaagacatgagaggccatccatatatcatgtcgacgtcgcctccatgtatccc
aacatcatgactaccaatcgattacaaccagattcaatgatctcagaggaagactgcgcg
tcttgtgacttcaaccgaccgggtaagacatgtgatagaagactcccatgggcatggaga
ggagaattttttcccacgaaaaaagatgaatacctcatgataagaaactctttacaaaac
gagagattcccaggtcgattccctgattctccgagtcgagacttcaaagatttgagctca
actgaacaggctgcagcaataaaaaagcggattactgagtacagtaagaaagtatatcac
aaagttaaggtaactgaaactattgaacgagaagcaattatctgccaacgtgaaaatccc
ttctatgttaacactgtccgagattttagagataggcgatatgaatttaaagggttacaa
aaggtctggaaacgtaaggtcgatgatattcctgcttcggatgttagtggccgtgaggaa
gctaagaagatgatagttttatacgactctctccaattggctcataaagttattcttaat
tcattctatggatatgtcatgaggaaaggatcacggtggtattccatggagatggcaggg
gtgacctgcttaactggtgcaacaattattcaaatggcaaggtcattggttgagagaata
ggaaggcctcttgaattagatacagatggtatttggtgtatattaccaaaaacattccct
gaagatttcacatttaatctaactgacggtaagaagctccctatctcatatccctgcgtt
atgttgaaccatcttgtccatgctaaatttacgaatcatcagtatcaaatactagaggat
tccactactcttcgctataaaactatcagcgacaacagtatttttttcgaagtagatggt
ccttataaggctatgattcttcctacctcgaaagaagaggataagaatctaaagaagaga
tatgctgtattcaatccagatggttcgctggctgaactgaaagggtttgaagtgaaacgt
cgtggtgagcttagacttattaaagcatttcaaagccaagtattttcggttttcttaaag
ggaacaacattaactgaatgctatgccgaagtaggaaaggtagcaaatagttggttagat
attttggactcgaaaggcaagactttggaagaagatgatctgatagacctcatttctgag
aacagaagtatgtcaaagacattgcaagaatatgaagggatgaagtctacgtctatttgt
accgctagacgtttagctgaatttttgggctctcaaatggtaaaggacaaaggtttggca
tgtaaatatatcatctctaagaaacctttgggagctgccatcactgacagagcggttcca
gttgctattttttctgctgagactagtgttaaaagccattacctcaaaaaatggctaaaa
gaccctgggttggatgactatgacccacgatctatcctggactgggattattatcgggaa
cgtcttgcctccaccatccagaaaatggtgacgattccagctgctcttcaacaagtgtct
aacccagtttctcgaatccaacatcctgactggttgcttaagagaattagtaccaaaaac
gacaagttgaaacagaagaagctgtcgtcttttttctctactggcagtaaacctatgacc
gatgcttcgaataaagtgaatcaattatctggatcaattttaaacaacgatcgcatccat
gacattgaagatttaaccttgggtgacgctcgagtcacaacggcaaaaataggaaaggta
gctatgaaaaggaaaggcaataattctgaagcacagtcagtggccctgcaagagcagttt
gtgtccctctctttggaaatgccctcaccagaggaagattacggagagtggctccgctat
cacaaaaagaaatgggcaattcagaagcagagtcgtcaaaatcgtcagcatctttttgga
gattcaagtcgcaagattggtgtgtctggattgattatgcaacaaactgaaacagcatac
tctaactcatggcaattcctccagttctgtccctcagaaaaaggtggcgaggcccgtgct
tttgtctacatcaacgataagatccagacgatcagaattaatgttggcagaagactatat
gttaactttcgtcgtgcaactccttctgtctatgaacttccaaattgtaaagttgaaaag
gtgaaccacacactacccaatggacgcacgtcggatcacttgtatcgactccatatgagt
gaatcagcatatgaaactgaaatggcaaaagctgatagcgttcttaagcatgccaacatt
gagggtatatatgaaagccaactcggtgccgaagataggtctttacttgaattgggatgc
acaactatattagacaactctaagcctggtctcttgggtgctggtcttgaaaagggattt
tcgttagaatggttgaaaccatacaatgaagtttacttgctgaattccaaattgaactat
ttgttcctgtgtcatcttgtatctcatgagcttcaagtatttgcattggttccaagttgg
tcgagccaagcttttgtcttcgtgttaagaccatctaggtctgctcaaggtctccctaat
cttagcaagtcgtatgaagaattcctcaaggaaagtaatgtctcgatggatcctggcagt
ccaatcttcaactatcaagatcagctggtattcgaagaatcttactttgatgatatttct
aagttatataaaaagctgggacaggctattaccaagcttcacagtgaaaatgcgaccaag
gcgatattgtgcatccagtcaccacaagccggccggctgaagaagttactgaggcccata
aacgattttcccaacattgaaatacgttcatcaacaatggctattcctcaaattggctgg
cagactgctgctgccaaacggatttgcaagtcctatctcagtctgagatcttggattggg
ctttattgcagactctcaagatactccgatgtaccaattggaaatcttaaaggtgatgat
atacgttacttgatcgatgttatctacgctagacgcttgcaacagtctaatatagttctt
tggtggtcaaacagtccaattccggataatggaggctcagaaaaagacagcattttaccc
ctcatcgaccctgtgagtctgccaactgtgaacaattctggcgtctactcgaaaatttgt
atagatctccaagtgaggaacttatctgtcaataccatattgactgccgcgattattaat
gaggcagagggggcggatcttgctgggtctatagttcaaggagacggatcatctaattct
acaccttttgttgaaaatgccttctccacgccggctcttgctgtgctaagcaatctcgtt
aaagagtggtggaaccaagctctggcaaatgacgagacagccgatgatatggtgaactgc
ttcatctcgtgggtgtcttcttcgaattcatttctgtatgaccagacactctattatcat
gtccaaaatttatcaaagaaagcattcattcagttggttagagagttccgaaaagccggc
tcacaacttgtatttgcagatcaaaagcgctttgttctcatgactcctaagaaaattctt
gaaaatacctattcctatgcaaattttctgatcaagacaatcaggtcgaagcctctgttt
aatttcctggatatatccctcacagagtattgggaagtcctagtatggatggatgatgta
aacttttgtggcaaatcctgtaaaagtctttctgccagtgggaaggataccgttcaaacc
tttttcaactggcacattggtagattcctcccaccacttttgcaaacagaattcgaggag
tcggtgttgtcatttatggagaagtactgtgattatagagatcagttccagaagaaacaa
caagaaactcttggtgtacgccagactcaaatatccagcactgctctccaacgggttagt
acggatgaggataataatgacagcgaaatagacaatcattttgcaaatggcatttttgaa
gctattaggccgcagcttgtaaagcgtgtcaagcaactattgaaaatatacttggatgga
aagtcaaacccagacatagctgttcaatttgaatttcctgttctggcaggatcccgcctg
caattgagcaatccaatcacacagttcgtgaagtccttgtgtgccgtatatggtctctcc
aaagagctgaatttggaatcacggacactacgaagaaatttactaagtattcttggtatc
aaggagttcactgaggaggcaagtttcaagaaccccagtgcctctttgataattgatagt
gtggtctgtgagaattgctacttcgtttgcaatcttgatttatgtcgccaggacgatctt
gttcgaaaagatacggtaggaaacacagtatattatagctgggcttgtgaaaactgtggt
aaggactataatagaattgtcttggaagaaaggcttattcagaacatccaaaaacttgtt
actagttatcaaatccaagatcttaaatgtgaaaaatgtaaaaagatcaaatcggatgag
ctaagtgtgagatgcgagtgctcaggaaactgggtggaaacaattccttcgagccatgtg
ctgaagtcgatcgaaacatatgacagagtagcacagttctatgagttaaaatttcttcaa
gacgttacaagccacttaatttaa
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integrated database retrieval system
