Sugiyamaella lignohabitans: AWJ20_3982
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Entry
AWJ20_3982 CDS
T05270
Symbol
SNF5
Name
(RefSeq) Snf5p
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03082
ATP-dependent chromatin remodeling
slb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AWJ20_3982 (SNF5)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AWJ20_3982 (SNF5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slb01009
]
AWJ20_3982 (SNF5)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_3982 (SNF5)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_3982 (SNF5)
Protein phosphatases and associated proteins [BR:
slb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
AWJ20_3982 (SNF5)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
AWJ20_3982 (SNF5)
SWI/SNF complex
AWJ20_3982 (SNF5)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
AWJ20_3982 (SNF5)
PBAF complex
AWJ20_3982 (SNF5)
SWI/SNF complex
AWJ20_3982 (SNF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
30036063
NCBI-ProteinID:
XP_018733657
UniProt:
A0A167C3R9
LinkDB
All DBs
Position
C:857672..860077
Genome browser
AA seq
801 aa
AA seq
DB search
MSFPFEQQYNQFMVDESSGTQFNSDNGGSANMLISQVPGNTSNQQLMQQSSQPSQQQQFR
NSFQFQGQPGSQMAGPRQNQGPAAVEQTRNVSMNQGQFHVNTPQSQLQPQSSQGPVNQAK
YAQFLQQQLQHQQHQTPALAGQADGLQTPPSAMVRGSQTNQNAMVSGANPGNVQFQMSQY
APNTSGPQNQRINLGQSGSLGTKFAGSSALPGNPGDSAPGGPVLSASGGPNAAGVHGIHP
VPSNIGAPVVPITGHQPSDRSNIPPRPALPNEILSAVKELPNSTLEEKTLIELLTKDAEQ
ELIFAKQEQRHAGLIYRKQVEYDYYDQVRQLRQVQPSAIFGDGYSGYGNSWTGSRMNLIY
PRDRKRGKRESSELFLSMEQLEYIASIPELLAPIRLDIDLDKYRLRDTFTWNLNEKLISV
DLFAQNLAEDYNIPLSYAPLIANNINEVLNDFHPHAFVEAAEDQDQASSGLHSSSATGEE
SSGTVITSVNTSTTSSNPAGDVTVTTTTNDGISENLTPNGYATNPTLSNRNDDMRITIKL
DITVGQHNLVDQFEWDLNCMDNNPEQFAEAMCRDLSLSGEFATAIAHAIREQTQLFTKTL
FLVGHQFDGRPIEDDDIVRELCPPVTSDAFLRNTSFIKDFSPVLFEIPHVELDRQDKDRD
RDSRRKRRQGRAGRRGGPTLPDLRETVRTFRTPVYSSLLPGGIDKVLELVRKQATKAEES
DDDDDTPRPVTVGRRGRPPAHAQLSGVSTFRASPAALPSSSSRMASPQFRYHQQIQSVED
HYLVKLRIPPRIRDEVNRISL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttccatttgagcagcaatacaaccagttcatggtagatgagagtagcggcaca
cagttcaattcagacaatggaggatctgctaatatgttgatttctcaagtacctggtaat
acatctaaccagcagttgatgcaacagtcttcacagccttcacagcagcagcagtttcga
aactcatttcaatttcagggtcagcctggtagtcaaatggcgggcccaaggcagaatcag
ggaccagcagctgtagaacagactcgcaacgtttccatgaatcagggtcaatttcacgta
aatactcctcaatcacaactccaaccacagtcttcccaaggaccagtgaatcaagcgaag
tatgcacaatttttgcaacaacagctacaacatcagcaacatcaaaccccagctctggcg
ggacaggcagatggattacagactcccccctctgcaatggtgagggggagccaaactaac
caaaatgctatggtctctggagctaatcccggaaatgtgcaatttcaaatgtctcaatac
gcacctaacacttctggaccacaaaatcaacggattaatttaggacagtcgggtagtcta
gggacaaaattcgcaggatcgagcgctctaccaggtaatccaggtgactcagctcctgga
ggccctgtactgtccgcttcaggtggtcccaatgctgccggtgtgcatggaattcatccc
gtacctagtaatattggagcaccagtggtcccaattacgggccaccaaccgtccgatagg
agcaatattccaccaagacccgcgttaccaaatgagatcctttctgcggtgaaggagtta
cctaattctactctggaggaaaagacgcttattgagcttttaactaaagatgctgagcaa
gagctgatatttgctaagcaagagcaaagacacgctggtcttatctaccggaagcaggtg
gagtatgactactatgaccaagtacgccaattaagacaggtacaaccgagtgccattttc
ggcgatggctattctggttatggaaacagctggactggatcaagaatgaatctaatttat
ccccgagacagaaagcgaggcaaaagagaatcaagtgagctgtttttgtcaatggagcaa
ctggaatatattgcatctataccagagctacttgctccaataaggttggacatcgatcta
gataagtatcgacttcgtgatacgtttacatggaacttaaatgaaaagctaatctccgtt
gatttattcgcacagaatttagctgaagattataatattcccctgtcttatgcccctctt
attgcgaataatattaacgaagtactaaatgatttccatcctcatgcgtttgtagaggcg
gctgaagaccaagatcaggcaagcagcggactccatagtagctctgcaactggagaagag
tcatctggaactgttattacttcagtgaacacttctactacgagttctaatcctgctggt
gatgttaccgttactactacaactaatgacggtatatctgagaatttgacccctaatgga
tacgccacaaatcctacattatctaatcgaaatgacgatatgagaataacgatcaagctg
gatattacagttggtcaacataatttggttgaccagttcgagtgggatttgaattgtatg
gacaataatcctgagcagtttgcagaagccatgtgcagagatctaagcctctcaggcgag
ttcgcaactgctatcgcacatgcaattcgtgagcaaacacaacttttcacaaaaacatta
tttctagttggccatcagtttgacggccggccaatagaagacgatgatattgttcgcgaa
ttgtgcccacccgtgacttcggatgcctttctcaggaacacgtcgtttatcaaagacttc
tcacctgttctatttgagattccgcatgtcgaactcgaccgtcaagataaggatcgtgat
cgtgacagtcgtcgtaaacgaagacagggccgtgctggtagaagaggaggtcctacatta
cctgacttgcgggaaactgtccgcacatttcgtactcctgtttactcatcattattacct
ggtggtattgataaagtacttgagcttgtccgcaaacaggcaactaaggccgaggagagt
gatgacgatgatgatacaccacggccggttaccgttggtagaagaggtaggcctcctgcc
catgctcaattgtctggtgtgagtacatttcgagcatcacctgcagcgcttccatcaagt
tcttcgagaatggctagcccgcaatttcgatatcatcagcagattcaatcagttgaagat
cattatctggttaagcttcgcattccacctcgtatacgggatgaagtcaatcgtatatct
ctgtga
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integrated database retrieval system
