Sugiyamaella lignohabitans: AWJ20_4003
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Entry
AWJ20_4003 CDS
T05270
Symbol
NUP116
Name
(RefSeq) FG-nucleoporin NUP116
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_4003 (NUP116)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_4003 (NUP116)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_4003 (NUP116)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AWJ20_4003 (NUP116)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AWJ20_4003 (NUP116)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
30036088
NCBI-ProteinID:
XP_018733678
UniProt:
A0A161HFC8
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Position
C:complement(925146..927719)
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AA seq
857 aa
AA seq
DB search
MFGATNTSPFGATNNATNTGTGLFGSTNNNTATSPFGASTGTQSSLFGAKPATATGGMFG
SNTATTTNNAFGGTSNTGAFGSSGGFGTNTNTNSTSPFGSTFGANNNSTTNTGGGLFGQQ
AAKPAFGGFGATNNTATTSPFGTTTNNTSGGLFGQNNNAGNTGTGLFGANNTNTSSPFGS
ASSTTNAPAASSGFGGFGGTATQQQNKPAFGFGNSGTTNTTTTSPFGQSTTNTGTGLFGQ
TNTANTGGSGLFGNTSSQNTNTGTGLFGQNNTAGGATGTSGTGLFGQSNNNATSNTASPF
GGFGAANNQQNTGATTGGLFSNAAKPAGSLFGGGATTTAPATSGLFGGSTPGATATGSFG
VDGGANSAKPSLFGTAPAATAKPTTGLFGGANNPLGTRGTFGAPNDTTPRFGLAGNTSAQ
QQGTSLFGQAAKPSLFSQPSNASTNGGLSLSGSTGATQLNNSQLLASVDQNPYGNNPLFT
SVNGQQAQSQPGTPVATPLSTTPSSNRKKQGIVSAYKLAPKPLFSPRPRHVGSGSPGNRS
SIMGSSATGADDSINGDRTLGKLTRTGSNSPNAVANSVYSLHADEAILSSNAFSPHGSSV
RRLIIDRKRTPNNSLLLTDGRSVADESSQLLTPGPSNTSVLPGSIASLDLSETTIPGTPS
PNGALRTSVSPEKPFNRGMNNNGVANDSATTASAPAKPKPVLPDNEIVDEHGYWISPSQE
KLDHMSLKELEGVKNFTVGRKGFGFVRFDVPIDLSQYSSVFKQIPGRIVIFGKKSCVIYP
DTSSKPAPGSELNVKATISLEGVWIMTKDTREPVKDPNHPLYDKHLQRLKNLKFTTFVSW
DKETGTWVFKIDPSAES
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaccaataccagtccatttggtgctactaataatgctaccaataccggt
actggtctttttggctctactaataataacacagccaccagtccttttggcgcatctact
ggtacacaaagctcattgtttggtgctaagcccgctactgccactggtggtatgtttggt
tccaacactgctaccactactaacaatgcttttggaggtacatccaacactggcgccttt
ggttcgagtggtggttttggtactaataccaacaccaactctacatcccctttcggctca
acttttggcgcaaacaataactcgactactaatacaggtggtggattgttcgggcaacag
gctgcaaaacctgcttttggtggattcggggcgactaataataccgccaccacttcacca
tttggtaccactactaataatacaagtggtggcctttttggtcaaaacaataatgcgggc
aacactggtacaggactatttggtgccaataatacaaatacatcgtctccttttggtagt
gctagcagcaccaccaatgcccctgcagcttcctcaggatttggtggtttcggtggcacc
gctactcaacagcaaaacaaaccagcttttggatttgggaattctggcactactaacacc
accaccacttctccatttggccaaagtactacaaacactggtactggcttgttcggccaa
accaatactgctaatactggaggtagtggactgtttggaaacacaagttctcagaatact
aatacgggaaccggcttgtttggccagaataacacagctggtggtgccacgggtacatca
ggcacaggactattcggtcaaagtaacaacaatgccactagtaatacagcaagtccattt
ggcggttttggtgctgcaaacaaccagcagaatactggggccacgactggcggccttttt
tcaaacgcagctaagccagctggtagtttgtttggaggtggtgccacaaccactgctcct
gctactagtggactatttggtggttctactcctggagcaactgcaactggtagttttggg
gttgatggtggtgcaaattctgctaagccttcgttgtttggtacagctcctgccgcaact
gccaaaccaactacaggattatttggaggtgctaataatcctctaggaactcgtggaacc
tttggagctcctaatgatactaccccaaggtttggtttggctggtaatacatcggctcag
cagcaaggtacctccctttttggccaggccgccaagccttcgctgttttctcaaccatca
aatgcttccacgaatggcggcttgtcacttagtggtagtacaggtgcaacccagctcaac
aacagtcaactacttgcgtctgttgaccaaaatccatatgggaacaaccccctgtttact
agtgttaatgggcagcaagctcaatcacagccaggaactcctgtcgccacccctctatcc
acaaccccttcatctaatagaaagaagcaaggcatagtttctgcatacaagcttgcacct
aagccattgttctcacctcgtccacgacatgttggatccgggtctccaggtaatcgctct
tctattatgggcagctcagcaactggtgctgatgacagtattaacggtgataggactctt
ggtaagctcactcgtacgggatccaacagtccaaatgctgttgcaaacagtgtctatagc
ttgcatgcggatgaagctattctctcctccaatgcattctcgccccatggatccagcgtt
agaaggcttattattgacaggaagcgcacacctaacaacagtctccttttgaccgatggc
cgttctgtggcagatgagtctagtcagttgttgacaccaggcccctcgaacacttcagtt
ctgcccggcagcattgccagtcttgacctgagtgagaccaccattcctggtactccttcg
cctaatggagcacttagaacgtcggtatctcctgaaaagccctttaaccgaggaatgaat
aataatggcgtagctaatgatagtgccacaacggctagtgcacctgcaaagccaaaacct
gttcttcctgataatgagattgtcgatgaacacggctactggatatctccatcacaagaa
aaactcgaccatatgtctcttaaggagctggagggtgtaaagaactttacagttggtcgt
aagggatttggtttcgttcgttttgatgtgccaattgacctaagtcaatactcaagcgtg
ttcaagcagattcctggtcgaattgttatttttgggaaaaagtcttgcgttatttatcct
gacacgtcaagcaagcctgctcctggtagcgagctgaatgtcaaagctaccatctcgcta
gaaggagtgtggatcatgactaaggatacacgtgagccagtcaaagacccgaaccaccct
ctctacgataaacacctccagagactcaaaaacctcaaattcacaacattcgtgtcatgg
gataaggagactggaacctgggtattcaaaatcgacccctctgctgagtcgtag
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