Sugiyamaella lignohabitans: AWJ20_4045
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Entry
AWJ20_4045 CDS
T05270
Symbol
SIN3
Name
(RefSeq) transcriptional regulator SIN3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
AWJ20_4045 (SIN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_4045 (SIN3)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
AWJ20_4045 (SIN3)
REST complex
AWJ20_4045 (SIN3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
AWJ20_4045 (SIN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
30036134
NCBI-ProteinID:
XP_018733719
UniProt:
A0A167C5G6
LinkDB
All DBs
Position
C:1105161..1109414
Genome browser
AA seq
1417 aa
AA seq
DB search
MDPNPIRVTTPMGTTSRPDGEPTIPYPGDGRWGGPPQGPGQGLPPVAGQPQLQGPGQVQV
LEQQQVQPPGVPGQQPQGPHPQYQRVPSVTELGPGGAGGLPPQLQQPQQPPQQPGQQQPQ
YPGYLAEQQQQQQQQQQQQQQQQQQQQQQQQQQQHPMGPPDPQTQPFNSNGAMSELHAAA
NGGRPPMMTEQQRRQGGGPVEFNHAINYVNKIKNRFASQPEIYKNFLEILQTYQREQLRI
AEVYTQVTLLFKEAPDLLEDFKQFLPDTSQPQGQMGPGAGGQEAMRLPPVGNFAPPGSIG
AGGPAAAIGRDAGIGPGGKKKKGGATNAEQAYQQQQQQQQQQLQMQQQQQAISQQYGGYN
IDSNNGVPVSSLRSGGPTIAGTGRGGKGKGAGGNMMIREPSPTLVPAIPEPLPPPSRSGG
LHDEIAFFDKVKKFIGNKQTYNEFLKIINLFTQKIIDKNVLVERVDGFIGNNKELMDWFK
RFVKYEGKPLHIENIVHKKHNLDLSLCRSYGPSYRLLPKSETLMPCSGRDEMCWEVLNDE
WVVHPTWASEDSGFVSHRKNQYEEILYRVEEERHEYDYYIGSNLRTIQTLETIANRIANL
TNEEKAIFKLQPKLGTDSTIYQKIIRKIYDKEKGLEVIEALHENPAVAVPIVLRRLKQKD
EEWKRAHREWNKVWRETEQKIFYKSLDHIGLTFKQTDKKLLTTRSLVSEITTVKAEQNSK
RKNPALPLPKSQLVFKMADNDVLLDILRLVLSFLEHGGSYSSNDRERMEAFFRSFLELFF
SLPPNLISERFPENEGRKSSSPEAEDESKTDGGAAATAAGAVSNGSTGAGGSKKRAREPS
GDLLRDVLKKSRFNGRADLSPSAEVELDTETDSPAETPVPSAEDTTGAENTNIPRFGDSE
DAWLKHAQTSPSPELGAKNDNQKREVFNLFANTTIYVFVRILQILYDRLEEVKGYESLVS
EEIANSFNVDFANDLGLYDTKLADMGLRFDSKDCYGQLLSLSERLIEGEVEHQWFEEAIR
QAYRNRAYKFYTIDKIVQALVKHVHAIVGDQKSSDVLVLFQADRVEPLSDIKKQIAYRMQ
VKKIIGSDESLFRIDWNDEEKRIGFQFLGNYDLTMRDIKKAEDKWNYYLTSYMMSVPTEG
VALDRIKAPLLYRSMIELVDENYPFVIIEQGLMARVCMNTYKLFFEAGTVDFFTRPGVDN
SVLRTPAVLEGRKNRWSSIIDGPDGWKSGLSETDIKNTEDRFKIWEEQGPEAFEKWEAPV
VAVEPEATANGTSDEQTNQTEAAVVPTGETTVDEAKPLEAPADAMEVETTSNGVKAADDT
TSEPAAGEPSSEKSEVVAPESKLTTDDEPKPKLDASSEVKSENDSKPEPSAGEQEASAAA
ATETSSPSSAPTSTTNPAGDADQQPPKAADGDVEMSG
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaacccgattcgtgttacgacgcccatgggtactaccagcagacccgatggt
gagcctactatcccgtatccgggagatggaaggtggggtggtcctcctcagggtcctggt
caaggtcttcctcctgtggcaggtcaaccgcagttacagggtcctggacaggttcaggtt
ttggagcaacagcaggttcagccacctggggttccaggccagcagcctcagggacctcat
cctcagtaccagagagtgccatctgtgactgaattgggtccaggcggtgctggaggactg
cctcctcagttgcagcaaccacaacaaccacctcagcagcctggtcagcagcaacctcag
tatccaggttacttggctgaacaacagcaacaacaacaacagcagcagcagcaacaacaa
caacagcagcaacaacagcaacagcaacagcaacaacagcagcatccaatgggtccccca
gatcctcagactcaaccgtttaatagcaacggtgccatgtcagaattgcatgccgctgcg
aatggcgggcgtcctccgatgatgacggagcaacaaagaagacagggaggtggtccagtc
gagttcaaccatgctattaactacgtgaacaagatcaagaacagatttgcatctcaacct
gagatttacaagaactttttggagatcttgcagacttatcaacgcgagcagttgcgcatt
gctgaggtttacactcaagtcactttgttatttaaggaagctcctgatttgttggaggat
ttcaaacagttccttcctgatacctctcagcctcaaggacaaatgggcccaggtgctggt
ggccaggaggctatgagattacctccagtgggtaattttgctcctcctgggtctattggt
gctggtggcccagctgctgcaattggcagagatgctggtattggtcctggtggtaagaag
aaaaagggaggcgctacaaacgctgaacaggcttaccagcaacagcaacaacaacagcag
caacagcttcaaatgcagcagcaacaacaggccatatctcaacagtatggcggttataac
attgactcgaataatggagttcctgtgtctagtttgagatcgggtggtcctaccattgcc
ggtaccggccgtggtggtaaaggtaaaggagctggtggtaatatgatgattcgcgagccg
agtcccactttagtaccagcaattcccgaaccattacctcccccatcgcggtctggcggt
cttcatgatgaaatcgcctttttcgacaaggtcaagaagtttattggtaataagcaaact
tataacgagttcttgaaaatcatcaatttgttcacccagaagattattgataaaaatgtt
cttgttgagcgggtcgatggatttattggtaacaataaagagctcatggactggttcaag
cgatttgtcaaatatgaaggaaaaccgttgcacattgagaacattgttcataagaagcac
aatctggacctgtccttgtgtcggtcatatggtccatcatatagattgcttcccaagagt
gagactttgatgccatgttcgggtcgagatgagatgtgttgggaggttttgaatgacgag
tgggttgttcaccctacttgggcttcagaagactctggatttgtatctcaccgtaagaat
cagtacgaagagattttgtatcgagtagaagaggaacgacatgaatacgattattatatc
ggatctaacctccgtaccattcaaactttggagactattgctaaccgtattgctaatttg
actaatgaggaaaaggcaatcttcaagttgcaacctaaattaggaactgactcgaccatt
tatcaaaagatcattcgcaagatttatgacaaggaaaagggactcgaggtcattgaagct
cttcatgagaatcctgctgttgcggtgcctattgtgttgcgtcggttgaaacagaaggac
gaggaatggaaacgtgctcaccgtgaatggaacaaagtgtggcgtgaaactgagcaaaag
atcttttacaagtcactggatcatattggtttgacgtttaaacaaactgataaaaaactt
cttactaccagaagtcttgtatctgaaattactactgtcaaggctgaacagaactccaaa
cgtaagaaccctgctctgcccttaccaaagtcacaattagttttcaaaatggctgataat
gacgttcttcttgacattttacgtcttgtattgagctttttggagcacggtggctcttat
tcaagcaatgacagagaacgtatggaagctttcttccggtctttcttggagcttttcttc
tcgctccctcctaatctgatttctgagaggttccccgagaatgagggccgcaagtcttct
tctcctgaagctgaagacgaatctaaaactgatggtggtgctgctgctactgctgctgga
gctgttagtaatggcagcactggcgctggtggttcgaagaaacgtgctagagagccttca
ggagatttattgcgagatgttcttaaaaagtctcgattcaacggtagagctgatctgtca
ccttctgccgaagtggaactggatactgagacggacagccctgctgaaactccagttccc
agtgctgaagacacaactggtgctgaaaatactaacatcccacgattcggcgattctgaa
gatgcttggttgaagcatgctcaaacttctccatcgcctgaactcggcgccaagaatgac
aaccagaagagagaggtgtttaatctgtttgcgaacaccactatttacgtgtttgttcgt
attttacaaattttgtatgatcgactggaagaagtcaaggggtacgaatcacttgtatcg
gaggagattgctaacagttttaatgttgattttgccaatgaccttggtctgtacgacacc
aaactggccgatatgggactccgctttgatagtaaagattgctatggccagctgctttcg
ttgtctgaacgattgattgagggcgaggtcgaacaccagtggttcgaagaggctattaga
caagcttatagaaacagggcttacaagttctacacgatagataagattgtgcaggcactt
gttaaacatgtccatgccattgttggcgaccaaaagtcgtctgatgttttggttctgttc
caagctgaccgggtcgagccacttagtgacattaagaaacaaattgcttacagaatgcaa
gtcaagaagattatcggatccgatgagagtttattccgtattgactggaacgatgaagag
aagcggattggattccagttccttggcaactacgacttgaccatgagagacatcaaaaag
gcagaagacaagtggaactattacttgacatcttatatgatgagcgtgcccactgaggga
gtcgctctagacagaatcaaggcaccactgctgtaccgatcaatgatcgagctggttgac
gaaaattatccatttgtgatcatcgagcaaggactcatggcccgtgtttgtatgaacacg
tacaagctgtttttcgaagcaggcacggtagatttcttcaccagacccggtgtagacaat
tcagttttgagaacccctgctgtgcttgaaggcagaaaaaaccgttggtcgagcatcatt
gatggtccagatggatggaaatcgggactcagtgagacggatatcaagaacactgaggat
cgattcaagatttgggaagagcaaggacccgaagcttttgaaaagtgggaggctcccgtg
gttgctgttgagcccgaggctactgccaacggtaccagcgatgaacaaaccaaccaaacc
gaagctgctgttgtccccactggtgagaccacagttgatgaagccaagcctctcgaagct
cctgctgatgctatggaagtggagaccacatccaacggagtgaaagctgctgacgacacc
acctctgaaccagctgccggcgaacccagctcggaaaagtccgaagtagttgcacctgag
tccaagctcacgaccgatgacgaacccaaaccgaagctggatgcttcatctgaagttaaa
tctgagaacgattccaagcctgaaccttctgctggcgagcaagaagcatctgccgcagct
gccaccgaaacttcatccccctcttctgccccaacgtcaaccaccaatcctgctggagac
gctgaccagcagcctcccaaagctgctgacggagacgttgaaatgagcggttaa
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integrated database retrieval system