Sugiyamaella lignohabitans: AWJ20_4123
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Entry
AWJ20_4123 CDS
T05270
Symbol
MSL5
Name
(RefSeq) Msl5p
KO
K13095
splicing factor 1
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_4123 (MSL5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slb03041
]
AWJ20_4123 (MSL5)
Spliceosome [BR:
slb03041
]
Complex A
Other components
Complex A specific factors
AWJ20_4123 (MSL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_3
DnaJ_CXXCXGXG
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
30036221
NCBI-ProteinID:
XP_018733796
UniProt:
A0A167C7J2
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Position
C:complement(1356988..1358946)
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AA seq
652 aa
AA seq
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METNRCSGTNSVPLGQTRRAGSGEDGSSGSSSSMALATTGSYGAGNGVDGVVVPRGRQPT
KQRQPKLNRWSAENDANAIAALVGMNTSLTGILTPEQMEAYATHYRIEEITQKLRTNDVI
PPEKDRSPSPPPQYDAQGLRINTRDVRYRNLLEKERHALVEKAMKFIPLYKPPSNYKRPQ
KTQEKIYIPRNDYPEVNFVGLLLGPRGKTLKEMEMKSGAVINIRGKGSVKEGKRTRTDIP
YQDTMDDELHCLVTGDSEAKIQKAIDLINEIVATAASTPEYENSHKREQLRSLAALNGTL
RDFTTQPCSNCGELGHRRFDCPNKKSFVSSVVCRNCGGVGHFARDCKEPRKYGNNGGGRG
NDSFNQPKSAADQEYEQLMMELGAGGGSGSGGSRASGLNNTPLGRIGYNNSNNNSGGGNN
NSYGPGSNGSGFGSGPSGPGSGSYSDNRRGGRDRDGDRGRDNRRFDDRRDRRDDRRDDRR
DDRRDDRRDDRRNDYRDNYRDRDRDRDRNRDSYGSSYGNDSGPRHDFGGRSDSRNYNNTN
IPFTPSPGMSSIPGIPFTPGNIPGLGPVPTSHTPPIHNSHNQPPPPPTSNNYGPPGIPGV
PGLASSRATNAPPGLPGPPGLGAPPGLPPPPPSASRPPAPSSRLPPPPPPGK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaacagatgttcaggaacaaatagtgtcccacttggccaaactcgaagagct
ggcagtggtgaagatggtagtagtggtagtagcagcagtatggctttagccacgacagga
tcttatggagctggtaatggagtcgatggtgtagtagtacctagaggacgtcagccaaca
aaacagagacaaccaaagttaaatcgatggagtgctgagaatgatgcaaatgccattgct
gctctggttggaatgaataccagtttaacgggaattttgactccagaacagatggaagca
tatgccactcattacagaatcgaggaaatcacccagaaactacggacaaacgacgtgatt
cctccagaaaaagaccggtctccttcaccacctccacaatatgatgctcaaggtctacgt
atcaacacaagagatgtccgatatagaaacctgctggaaaaagagcgtcatgccctagtt
gaaaaagcaatgaagttcattcctctttataaaccgccaagcaactataagcgaccacaa
aagacacaagaaaagatttatattccaagaaacgattatcctgaagtcaattttgtagga
ttattattaggacctcgtggcaagacgttaaaagaaatggaaatgaaatcaggagctgtt
attaatattcgaggtaaaggttcggtaaaagagggtaaacgaacgcgaactgatatcccc
tatcaagacacaatggacgatgaattacattgtctagtaacaggagattcagaagctaag
attcaaaaagcaattgatctgattaatgagattgttgcgacggcggcatcaacgcccgaa
tatgaaaatagccataaacgagaacaactacggtcgcttgctgctctcaatggtacatta
cgagactttacgactcagccatgttccaactgtggagaactgggtcacagacgatttgac
tgtccaaacaagaaatcgtttgtttcaagtgtagtatgccgcaactgtggcggagtaggc
cattttgctcgtgattgtaaagaaccaagaaagtacggaaacaatggcggtggcagaggc
aacgactcgttcaaccaaccgaaatctgccgctgatcaagagtacgagcaactgatgatg
gagcttggtgctggtggaggatctgggtcgggtggttcacgtgcctctggtttaaacaac
actcctcttggccggattggctataacaacagtaacaacaacagtggtggtggtaataac
aatagctatggaccaggatcaaacggatcaggatttggttctggaccatcaggaccagga
tcaggatcgtattcagacaatcgtcgaggaggacgcgatcgagacggggaccgtggccgt
gataacaggaggtttgacgaccgtcgcgaccgacgagacgaccgacgagacgaccgaaga
gatgaccgacgagatgaccgacgagatgaccgcagaaacgattacagagataactaccga
gatcgcgaccgtgatcgtgatcgtaacagagactcatacggcagttcctacggcaatgac
agcggtcctcgtcacgatttcggcggccggtcggattccaggaactacaacaacaccaac
atcccattcaccccatctccaggaatgtcttcaatccctggtattccattcactcctggc
aacatccctggtctcggtcccgtaccaacatcacacacaccaccaattcacaacagccac
aaccagccacctccaccacccacatccaataactacggacccccaggcatccctggtgtc
cccggactcgcctcctcacgcgcaacaaacgcgccaccaggcctccctggtcccccagga
ctcggtgcacctcccggactccctccaccaccaccttctgcctctcgtccaccagcgccg
tcctcacgtctccccccaccaccgccacctggaaagtag
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