Sugiyamaella lignohabitans: AWJ20_4151
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Entry
AWJ20_4151 CDS
T05270
Symbol
RNT1
Name
(RefSeq) Rnt1p
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AWJ20_4151 (RNT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_4151 (RNT1)
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_4151 (RNT1)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_4151 (RNT1)
Enzymes [BR:
slb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AWJ20_4151 (RNT1)
Messenger RNA biogenesis [BR:
slb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWJ20_4151 (RNT1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
90S particles
RNase
AWJ20_4151 (RNT1)
Prokaryotic type
rRNA processing factors
AWJ20_4151 (RNT1)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AWJ20_4151 (RNT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Ribonuclease_3
Ribonucleas_3_3
RNase_3_N
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
30036252
NCBI-ProteinID:
XP_018733822
UniProt:
A0A167C891
LinkDB
All DBs
Position
C:complement(1445320..1446903)
Genome browser
AA seq
527 aa
AA seq
DB search
MGKRGLETISGGNSPNDVSSETSENIKLTDLIALDYAMVSIQKHLKTILEVCPGLIDPKA
VREASTGTSGQAVEIQNLLGQKRIQLAKKIKLEDCNNKLPRLFYDLVSESSHDSDPASRP
NIPDFDIEPYTYKRAKLAKKEKKLKEVEDGNDEAPVSAKKVWPPSLPEIVDKGLENQVFT
HKSAVDRSYLSPAEILGVHNERLEFMGDAVLNFVASNLVYEVFPDASEGVLTTMRVMLVK
NDTIGEWATMYGLDKKLKTDKGKNEPTNSKVIADTFEAYIAGVYLDPQLGPKVVNQWLSD
LFRPSLSRASKDRNAAEPIDKDAKNLLYVQIGSHDMNPEYVPVLERGHGNEREYTVECRI
NNEVIGVGTGKSIRSAGLLAAMMALKNSPAIEKYSEIRRQSPRTVAPIGGKKNKPQLPDA
ELSSPDTISDTGLTDEFSDLSASYSEVPGQANSKKAELYAKISSAKWKPIYTTTVSGSEF
YSKVVMGSDLMGEGRGSNKKLAEQAAAANALANKSLMKKWTEKKHMG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagagaggcctggaaaccatctctggaggtaacagccccaatgacgtatcttca
gaaacttcggaaaatatcaaattgactgatttaatcgcactggattatgccatggtcagc
attcagaagcatctgaaaactattttggaggtctgcccagggttgattgatcctaaagca
gtcagggaagctagcactggtacttcaggtcaagcagttgagatccaaaatctgctaggc
cagaaaagaattcaacttgccaagaaaatcaagcttgaagactgcaataataaacttcca
cgactattttacgacttagtttcagaatcctctcacgactcagatcctgcctcaagacct
aacatacctgactttgatattgagccatatacctacaaacgtgcgaaacttgccaagaag
gaaaagaaattgaaggaggtggaagatggtaatgatgaggctccagtttctgctaagaaa
gtctggccgccttcgcttcctgaaatagtcgacaaaggtcttgagaaccaagtatttact
cataagtctgctgttgatagaagttacctcagtcctgccgagatcctcggggttcataac
gaacgactggagttcatgggtgatgctgtactaaatttcgtagctagtaatcttgtatat
gaggtttttcctgatgcaagtgaaggtgtacttacaacgatgcgtgtgatgctggtaaag
aatgatactattggtgaatgggctaccatgtatgggcttgataaaaagcttaaaaccgac
aagggcaaaaatgaaccaaccaactccaaggtcatagctgatacttttgaggcgtatatt
gctggtgtctatcttgatcctcaacttggtcccaaagttgtcaaccaatggcttagtgac
ctcttccgacctagtctttcgagggcgagcaaagatagaaatgcagcagagccaattgac
aaggatgccaagaatttgttgtacgtacaaattggaagtcatgatatgaatcccgagtac
gtgcctgttcttgaacgcggccatggaaatgaacgtgaatacactgttgagtgcaggatt
aataacgaggttattggtgtaggcacaggtaaaagcattcgaagtgctggacttcttgct
gctatgatggctttaaaaaattcacctgcaatagagaaatattctgagataaggcgccag
tctccgagaactgttgctcctatcggcggaaagaaaaataaaccgcaattgccagacgca
gagttgtccagtccagatactatatcagatactggtttaacagatgagttttctgattta
tcggcttcctattccgaagttccaggccaagcgaacagtaaaaaagcagaactttacgct
aagatctcttctgcaaaatggaaacctatttacaccacgacggtatctgggtctgagttc
tactccaaagtggtcatgggaagtgatctgatgggggaaggcaggggaagtaacaagaag
ctagctgagcaagctgctgcagcgaatgcactggcaaataaatcattaatgaagaaatgg
accgagaagaaacatatgggataa
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