Sugiyamaella lignohabitans: AWJ20_4549
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Entry
AWJ20_4549 CDS
T05270
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03030
DNA replication
slb03410
Base excision repair
slb03420
Nucleotide excision repair
slb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWJ20_4549 (RFC4)
03410 Base excision repair
AWJ20_4549 (RFC4)
03420 Nucleotide excision repair
AWJ20_4549 (RFC4)
03430 Mismatch repair
AWJ20_4549 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slb03032
]
AWJ20_4549 (RFC4)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_4549 (RFC4)
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_4549 (RFC4)
DNA replication proteins [BR:
slb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AWJ20_4549 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
AWJ20_4549 (RFC4)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
AWJ20_4549 (RFC4)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AWJ20_4549 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
AWJ20_4549 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
AAA_assoc_2
DNAX_ATPase_lid
Viral_helicase1
AAA_3
Motif
Other DBs
NCBI-GeneID:
30036693
NCBI-ProteinID:
XP_018734205
UniProt:
A0A161HJS5
LinkDB
All DBs
Position
C:2617496..2618332
Genome browser
AA seq
278 aa
AA seq
DB search
MPGIGKTTSVLCLARTLLGDTYKEAVLELNASDERGIDVVRGRIKAFAQKKINLPPGRQK
IVILDEADSMTPGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYTRLTDE
QVLKRLLQVIDAEGVKYSDDGLSALLFTAEGDMRQALNNLQSTWSGFGFVSGDNVFKVVD
SPHPLAVQRMIQACTQYNIDGALEELNTLWDKGYSAVDIIATMFRVTKSLPDVSEGDRLE
YIKEIGFTHMRILDGVGTFLQIAGCLARLAKLSTKSKA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtattggtaaaactacgtcagttctgtgtctggcgagaacgctgctgggagat
acatataaagaggcagttctggaactgaatgcatctgacgaacgtggtatcgatgttgtt
cgtggtagaatcaaggcttttgctcagaagaaaatcaatctaccaccagggagacagaag
attgttattcttgatgaggcagattcaatgactcctggtgctcaacaagctctcagaaga
actatggagatctattcaaataccacccgttttgcctttgcatgtaaccagtccaacaaa
atcattgaacctttacagtcccgatgtgccattctacggtatacccgattgactgatgaa
caagtgttaaaaagattgcttcaagtcattgatgccgagggggtcaagtactcagacgac
ggactaagtgcattactattcactgccgagggcgatatgcgacaggctctgaacaattta
caaagtacctggtctggattcgggtttgtcagcggtgacaatgtatttaaagtagtggac
tcaccacacccactggctgtccaacgaatgatccaggcctgcacccaatacaacattgat
ggcgctctcgaggagctcaacaccctgtgggacaagggctacagtgctgtcgacatcatt
gctaccatgttccgagtaacgaaaagtcttcctgacgtgtccgagggcgataggctcgag
tacatcaaagaaatcgggttcacccacatgcgcatcctcgacggagtcggcaccttcctt
cagatcgcaggctgtctggcccgactcgccaaactgtcgaccaaatcaaaagcatag
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