KEGG   Sugiyamaella lignohabitans: AWJ20_4549
Entry
AWJ20_4549        CDS       T05270                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03030  DNA replication
slb03410  Base excision repair
slb03420  Nucleotide excision repair
slb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWJ20_4549 (RFC4)
   03410 Base excision repair
    AWJ20_4549 (RFC4)
   03420 Nucleotide excision repair
    AWJ20_4549 (RFC4)
   03430 Mismatch repair
    AWJ20_4549 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slb03032]
    AWJ20_4549 (RFC4)
   03036 Chromosome and associated proteins [BR:slb03036]
    AWJ20_4549 (RFC4)
   03400 DNA repair and recombination proteins [BR:slb03400]
    AWJ20_4549 (RFC4)
DNA replication proteins [BR:slb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    AWJ20_4549 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    AWJ20_4549 (RFC4)
Chromosome and associated proteins [BR:slb03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    AWJ20_4549 (RFC4)
DNA repair and recombination proteins [BR:slb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     AWJ20_4549 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    AWJ20_4549 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid AAA_22 AAA_assoc_2 DNAX_ATPase_lid Viral_helicase1 AAA_3
Other DBs
NCBI-GeneID: 30036693
NCBI-ProteinID: XP_018734205
UniProt: A0A161HJS5
LinkDB
Position
C:2617496..2618332
AA seq 278 aa
MPGIGKTTSVLCLARTLLGDTYKEAVLELNASDERGIDVVRGRIKAFAQKKINLPPGRQK
IVILDEADSMTPGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYTRLTDE
QVLKRLLQVIDAEGVKYSDDGLSALLFTAEGDMRQALNNLQSTWSGFGFVSGDNVFKVVD
SPHPLAVQRMIQACTQYNIDGALEELNTLWDKGYSAVDIIATMFRVTKSLPDVSEGDRLE
YIKEIGFTHMRILDGVGTFLQIAGCLARLAKLSTKSKA
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcctggtattggtaaaactacgtcagttctgtgtctggcgagaacgctgctgggagat
acatataaagaggcagttctggaactgaatgcatctgacgaacgtggtatcgatgttgtt
cgtggtagaatcaaggcttttgctcagaagaaaatcaatctaccaccagggagacagaag
attgttattcttgatgaggcagattcaatgactcctggtgctcaacaagctctcagaaga
actatggagatctattcaaataccacccgttttgcctttgcatgtaaccagtccaacaaa
atcattgaacctttacagtcccgatgtgccattctacggtatacccgattgactgatgaa
caagtgttaaaaagattgcttcaagtcattgatgccgagggggtcaagtactcagacgac
ggactaagtgcattactattcactgccgagggcgatatgcgacaggctctgaacaattta
caaagtacctggtctggattcgggtttgtcagcggtgacaatgtatttaaagtagtggac
tcaccacacccactggctgtccaacgaatgatccaggcctgcacccaatacaacattgat
ggcgctctcgaggagctcaacaccctgtgggacaagggctacagtgctgtcgacatcatt
gctaccatgttccgagtaacgaaaagtcttcctgacgtgtccgagggcgataggctcgag
tacatcaaagaaatcgggttcacccacatgcgcatcctcgacggagtcggcaccttcctt
cagatcgcaggctgtctggcccgactcgccaaactgtcgaccaaatcaaaagcatag

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