Sugiyamaella lignohabitans: AWJ20_4560
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Entry
AWJ20_4560 CDS
T05270
Symbol
PRP19
Name
(RefSeq) E3 ubiquitin-protein ligase PRP19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03040
Spliceosome
slb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_4560 (PRP19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AWJ20_4560 (PRP19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slb03041
]
AWJ20_4560 (PRP19)
04121 Ubiquitin system [BR:
slb04121
]
AWJ20_4560 (PRP19)
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_4560 (PRP19)
Enzymes [BR:
slb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AWJ20_4560 (PRP19)
Spliceosome [BR:
slb03041
]
Complex B
Other components
Prp19 complex
AWJ20_4560 (PRP19)
Complex C
Prp19-CDC5 complex
AWJ20_4560 (PRP19)
Ubiquitin system [BR:
slb04121
]
Ubiquitin ligases (E3)
U-box type E3
AWJ20_4560 (PRP19)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
AWJ20_4560 (PRP19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_THOC3
WD40
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
EIF3I
Tricorn_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_ACSF4
DUF7099
U-box
DUF7165
B-prop_COPA_B_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Ge1_WD40
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
30036706
NCBI-ProteinID:
XP_018734215
UniProt:
A0A161HJT2
LinkDB
All DBs
Position
C:2652438..2653994
Genome browser
AA seq
518 aa
AA seq
DB search
MVPVSGEVPKNPVVTKTGHVYERSLLETYVKETGNDPVTGEAINLEEDIIVIQASSPSAE
GATNGTVIHPKQPTLTSIPSLLSSLQSEWDALILETFSLKQQLLKTRQELSTALYINDAA
VRVSARLTKERDEAREELAKLAASLGSVASSGANTSSMDVDANGQEGEESQPSVALPSAF
IEKITSKSQVLASTRKANSKKELPAEHTTVEGLGKFVESFKSKQLFASVSHLSVNEETGD
VVTGGGKSQGGIFSTSEKALIGDNFQASGIVTGVCWDNEAFAVATKAGVVDYYQADRTSK
PIHISSNQPLISIASFPAGQLVVTADKNGTWYVVDLESGTELSSISNGSPVTSLAVHPDG
ELVAVGSADGNIRIHKVTDEDFSEPAAVFPTGSDDSPAGSVTSLSFSENGYWLAASSSSL
VGQVQIWNLRKLSLLTTVPFETLNSEILSIKFDPSGQYLAAASSEGIEVAAYNKQGKSWT
PGVLTSSAGAVDLGWTTHAKSLVSITSKGSIHIFEQSE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggtaccagtttctggagaggtccctaagaacccagtggtgacgaaaacgggacatgtg
tatgaaaggtcgctgttggagacatatgtgaaggaaacaggcaatgatccagtgacggga
gaagctattaatctcgaggaagatataattgtgatccaggcaagcagtcccagcgctgaa
ggagctactaatgggacagtaatccaccccaaacagccaacgctgacatcaattccttca
ttactatcgtcattacaatcagagtgggatgctctaattctagagacgttttctttgaaa
caacaactgctgaaaactcggcaggaactgtcgactgcgttatatatcaacgatgcagcg
gttcgtgtcagtgcacgattaacaaaagaaagagacgaggcaagagaagaattagcgaaa
ttagctgctagtctgggtagtgtggccagttctggtgcgaatacttcaagtatggatgtg
gacgcaaatggacaagaaggagaagagagccaacccagtgtagcattgccaagcgcgttt
atcgagaaaatcaccagcaaatcacaggtgcttgccagtacacgaaaagccaactcgaag
aaagaattacctgccgagcacactacagtggagggactgggtaaatttgttgaatctttc
aagtcaaagcaattatttgcatctgtatcgcacttatcggttaacgaagagacgggcgat
gtagttacaggaggtggcaagtctcaaggtggaattttttcaacatcggaaaaggcgcta
attggagacaatttccaagccagtggaattgtcactggtgtctgttgggacaacgaagca
tttgcagttgcaacaaaggccggtgtggtggattattatcaagcagaccgcacttctaag
cctattcacatctcttctaatcaaccattaatatctattgccagctttcctgctggacag
ctcgttgtcactgctgataaaaatggcacctggtacgtcgtggatcttgagtcgggcact
gagttgagctcaattagcaacggcagtcctgtcacttcactcgcagttcaccctgatggt
gaattagtagcagtggggtctgctgatggaaacatccgtatccacaaggtcactgatgaa
gacttcagtgaaccagctgccgtgttcccaaccggttcagacgactcgccggccggttct
gtcacgagtctgtcattctcggagaacggctactggctggcggcttcgtcttccagtctc
gttggccaagtgcaaatttggaacttgcgaaagctgtctcttctcacaactgtgcctttc
gagacattaaactcggaaatcctatccataaaattcgacccctcggggcaatatctggct
gctgcctcttcagagggaattgaggtcgctgcatacaataaacagggcaagtcatggacc
cctggcgtcctgacgtcttcagcaggagccgtagacctcggatggaccacccacgccaag
agcttggtctcgatcacctcaaaaggcagcatacacatattcgagcaaagcgagtag
DBGET
integrated database retrieval system
