KEGG   Sugiyamaella lignohabitans: AWJ20_4716
Entry
AWJ20_4716        CDS       T05270                                 
Name
(RefSeq) hypothetical protein
  KO
K14397  cleavage and polyadenylation specificity factor subunit 5
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AWJ20_4716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slb03019]
    AWJ20_4716
Messenger RNA biogenesis [BR:slb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor Im (CFIm)
     AWJ20_4716
SSDB
Motif
Pfam: NUDIX_2
Other DBs
NCBI-GeneID: 30036878
NCBI-ProteinID: XP_018736247
UniProt: A0A167E8G4
LinkDB
Position
D:complement(334548..335276)
AA seq 242 aa
MTTVTETARKTTILPPLPKPFTEKQAPTIRLYPVSNYTFDVKEAQPEEDNSVTGRLQRLQ
EQYETSGMRRTCEGILVCHEHGHPYVLLLQIANTFFKLPGDYIQPDQDEITGFKQRLNER
LAPAKDSEHASDPINSEWEIGDCITQWWRPNFETFMYPFIPPHISRPKECKKMFLIHLPK
HKVLSVPQNMKLLAVPLFELYDNATRYGNQLAAIPLYLSRYNFEFVDSDDNVIATYPASN
AN
NT seq 729 nt   +upstreamnt  +downstreamnt
atgacgacagtcactgaaacagcaagaaaaacgacgattctaccgccactaccaaaacca
ttcacagagaaacaggcacctacaataagattgtacccggtgtcaaactacacattcgat
gtcaaagaagcacaaccagaagaagacaactctgttactggcaggcttcagcggttacaa
gagcagtatgaaacgagcggtatgaggaggacctgcgaagggatacttgtctgccatgaa
catggccatccatacgttcttctcctgcaaattgccaatacatttttcaagttgccaggc
gattatatccagcccgaccaggacgagataactggattcaagcaaaggctgaacgagagg
ttagcaccagcgaaagattcagaacatgccagtgaccctattaactcagaatgggaaatc
ggcgactgtatcacccaatggtggagacccaacttcgagacattcatgtacccgttcatc
ccaccacacatctcacgacccaaagagtgtaaaaagatgttcctgatacacctgccgaaa
cacaaagtactctccgtaccacaaaacatgaaactgctagctgtcccactcttcgagctc
tacgacaatgccacccgctacggcaaccagctggccgcgatcccactctacctcagtcgc
tacaacttcgagttcgtagactcggacgacaatgtcatagccacataccccgccagtaac
gccaattga

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