Sugiyamaella lignohabitans: AWJ20_4771
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Entry
AWJ20_4771 CDS
T05270
Symbol
rrn5
Name
(RefSeq) RNA polymerase I upstream activation factor complex subunit Rrn5
KO
K15217
RNA polymerase I-specific transcription initiation factor RRN5
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_4771 (rrn5)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
AWJ20_4771 (rrn5)
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GFIT
Motif
Pfam:
Myb_DNA-binding
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
30036939
NCBI-ProteinID:
XP_018736301
UniProt:
A0A167EA25
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Position
D:488843..490696
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AA seq
617 aa
AA seq
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MPPKRKSLPDISNEGPSQKKLFLQADYRIKYGKPQLEKYVAQFNKEVVEFLTGIDTSDSG
EQVDFVSEKDNDAGTEEPLVDDVSERTEPAINGSEAVTSKSEVVTNILEVDSDSEHSTNG
VLNRVDECSSSEDSIGIDETDLEPSEDDYRCGTIWSEEEKERFFTALGRKSCHDMAAISR
AVGTKTLIECEAYYNLLKSCYEYLKRRKPLLSKTLQREIFVSYEDLPYSYEMTESWDSVE
NKYANAVIDAIADMEVEKQNQQQETTNDQNGTTEHTNSEPLLLKLDTDTSSQHPIDTTLI
NGSSHEHPNTGTLQGVGSEISVSNVASSDYKVSATRTATTVATNVVPRKTLFAKRSGMCA
KASSQLLNIPEAVKFANMFFRQSQKNLGHMYHHGGRGQKKSHFYLEDISQEAVDYLENII
KSQTRLILGRYIWSAEDYDPSDEEHRNKAFYENLVHAMGYITRVNKHLQERYPRATFWKA
ISDFNGVEIDTYNTPPLQKNPADEYRFHFGVEPKHQNRFPFGLKQQFQPYEHLAYSQPTI
DVEDSYSPQQRRFFQQVLEAAQEVAQRRPEDSTSPSDIVKSSNTDDDIDRYLDLVEIDIS
RHEEKRLLVWFNGAEAT
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaagaggaagtcattgcctgacatcagcaatgagggtcctagccagaagaag
ttgtttttgcaggcagattatagaataaagtacgggaaaccacagctcgagaaatatgtt
gctcaatttaataaggaagttgtagaatttctgactggtatcgacacaagtgactctgga
gaacaagtagattttgtttctgagaaagataatgatgctggtaccgaagaaccactggtg
gatgacgtttcggagagaacagagcctgctattaatgggtcagaggcagttaccagcaaa
tccgaggtagttaccaacatattagaggtggatagcgattctgaacactccacaaatggg
gtgttaaatcgagtcgatgagtgttcttcttcagaagacagtattggcattgatgagaca
gaccttgaaccaagcgaggacgactacagatgtggaacgatctggtcagaagaggaaaag
gaaaggttttttacggctttggggcgaaaatcttgccacgatatggctgctatatctagg
gctgttggaacaaagactctcatcgagtgcgaagcatattacaacctccttaaatcatgc
tatgaatatctgaaacgaagaaagccgctacttagcaaaactctgcagcgagaaatattc
gtttcatacgaggatttgccatattcttatgaaatgacggagtcatgggactcggttgaa
aacaaatatgccaatgctgtaattgacgctatagcggatatggaggttgaaaaacagaac
cagcagcaagaaacgactaatgatcagaatggcaccacagaacacacaaattcggagcct
ttactgttaaaattagatactgatacctcttcacagcacccgatagataccaccttgatc
aacggttcatctcacgagcatccaaacaccggtaccctgcagggtgtcgggtctgagatc
tcagtttccaatgtagcttcatctgattataaagtatctgctactaggacagctactact
gtagccaccaatgtagtccctcgtaagaccctatttgcgaaaaggagtggaatgtgcgca
aaagcatcttctcaactgctaaatatacctgaagctgtgaaatttgccaacatgtttttc
aggcagagccaaaaaaatctgggacatatgtaccatcatggtggccgtggtcaaaagaaa
agccatttttatttggaagacatttcacaagaagcagtcgattatcttgagaatattata
aaatctcagacaagattaatattgggcagatatatttggagtgccgaagactatgatccc
agcgacgaggaacatcgtaataaagctttctatgaaaatttggtccatgccatgggttac
attacacgggtgaacaagcacctccaggaaaggtatccgagagctacattttggaaagct
atttctgattttaatggtgttgaaatagatacttacaacacccctccgctacaaaaaaat
cccgcagatgagtaccggtttcactttggtgtagagcctaaacatcaaaatcggttcccg
ttcggactcaaacaacaattccaaccatacgagcatttggcttacagccaacctaccatt
gacgtagaggactcatacagccctcaacagcggagatttttccaacaggttttagaagca
gcacaagaagtggcacaacgccgcccagaagattcaacgtcaccatctgatatcgtcaaa
tctagcaacacagacgacgacattgacagatatcttgatcttgttgagatcgacatatca
cggcacgaagaaaaacggctcctggtatggtttaatggagccgaggctacttag
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