Sugiyamaella lignohabitans: AWJ20_4845
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Entry
AWJ20_4845 CDS
T05270
Symbol
YKU80
Name
(RefSeq) Yku80p
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AWJ20_4845 (YKU80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_4845 (YKU80)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
AWJ20_4845 (YKU80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-GeneID:
30037021
NCBI-ProteinID:
XP_018736371
UniProt:
A0A167EC69
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Position
D:complement(707575..709068)
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AA seq
497 aa
AA seq
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MICLITNGTGEMDFKKVPDLVKRLKAANIVLRILMIGMKDSGDELTTFEKEIRQSNIEEL
QNIERDYYPPDSDGRPDDMYMFAPYEEAYFYVSKPVVQPVGVLRQFKGVLRLGRPTEDSE
SVKHVIDEENTITIPVYGYPCTRRTRVPTAKSVIVKRKRPDDDGGESEDDEFNDRKVTVH
FVRDYYVEKVKDENGEGEQNPDNRIILERQNLLKGYRFGSEIVTFDAETKKELSSIHLSN
SPELSIYGFCSAKDVPRWYLMEASDYIVVSPEARKKDQLAMSAMILTLQLDDRVAIARYV
AKPEKDAHMVLLSPYVDVDFQALILNILPFSQDYRKFQFPSLLEIKSKSGKILPPDNPQR
INREPTTEMNDLMSHYIDEMDLEHAGEPDEDGEPTEYMTCEDTFNPVLHRLRNAIKVAGL
TGAKNFVPPVWPELVKYSHPPAGRLDQLKPTTDRLSQLLDIKVVETKKSEKQKVKQEAEA
SKRVATDTDIKLEDLLS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtctcattacaaatgggacgggtgagatggatttcaagaaggttcctgatttg
gtgaagcgtctgaaggccgctaatattgtcctacgtattttgatgattggaatgaaagat
agcggagatgagctgactacatttgagaaagaaatccgacagtccaacattgaggaattg
caaaatattgagcgtgattattacccacctgacagtgatggtaggcccgacgatatgtat
atgtttgcaccctacgaggaggcgtatttttacgttagtaaaccagtggttcagccagtt
ggcgtactaaggcaattcaagggagtactgcggttgggaaggcccactgaggactcagaa
agcgtgaaacatgtcattgatgaagaaaacacaataaccattccggtgtatggctatcca
tgcaccagaagaacgcgtgttcccacagcgaagtctgttattgtcaaacgtaaaaggcct
gatgatgacggtggtgaatccgaagacgacgagtttaatgatcgaaaagtgactgtgcac
tttgttcgtgattattatgttgaaaaagtaaaagatgagaatggagaaggggagcaaaat
cccgataacagaatcattttagaacggcaaaatctacttaaaggctatagatttgggtct
gaaattgttactttcgatgctgaaacaaaaaaggagttgagcagtatccatctttcaaac
agtccagagctttctatctacggattttgtagcgcaaaagatgtccctagatggtatttg
atggaagcatcagattatatcgttgtaagccctgaagcacgcaaaaaagatcagctcgcc
atgtcagcaatgatcctgacgttgcagctggatgaccgtgttgccattgctcgatatgtg
gccaaaccagaaaaagatgcacatatggtgctattaagtccatacgtcgatgttgacttc
caagcgcttattcttaatattctaccattttcacaagactaccggaaattccagttccca
agtttgctcgaaattaaatccaagtcaggtaaaatattgccacctgataatccacagcgt
attaaccgggagcccactacagagatgaacgatctcatgagccattatattgatgaaatg
gacttggagcatgccggagaaccagacgaagatggagagccaaccgagtatatgacctgt
gaagacacatttaatccagtattgcatagactgcgaaatgccatcaaagtggccggatta
actggggcaaagaattttgttcctccggtgtggccagagctggttaagtactcgcatcca
ccagcagggcgacttgatcaactcaagcccacgacagaccgactgagccagctcttagat
atcaaagtagtggagaccaagaagagcgagaaacaaaaggtcaaacaagaggcagaagcg
tccaagcgggtggctaccgacactgacatcaaactggaagaccttctcagttag
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