KEGG   Sugiyamaella lignohabitans: AWJ20_5061
Entry
AWJ20_5061        CDS       T05270                                 
Name
(RefSeq) hypothetical protein
  KO
K13174  THO complex subunit 5
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03013  Nucleocytoplasmic transport
slb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AWJ20_5061
  09122 Translation
   03013 Nucleocytoplasmic transport
    AWJ20_5061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slb03019]
    AWJ20_5061
   03041 Spliceosome [BR:slb03041]
    AWJ20_5061
Messenger RNA biogenesis [BR:slb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     AWJ20_5061
Spliceosome [BR:slb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    AWJ20_5061
SSDB
Motif
Pfam: FmiP_Thoc5 HAUS3_CC DUF8146 Seryl_tRNA_N Ecotin Nup54_57_C Fzo_mitofusin
Other DBs
NCBI-GeneID: 30037262
NCBI-ProteinID: XP_018736580
UniProt: A0A167EHV5
LinkDB
Position
D:complement(1364424..1364921)
AA seq 165 aa
MSVIVDLRLGNWKAQQLINSTKETTAKTKHEADTILLDIQNIYYQHKHLNREIDQCESFV
SKHEQLDLVPLEQFLEENPHLKEEHDKNPASRNVNHMITLERLKDEEKRRLELFVTKTRL
HETRNKLNLEIKSLRDGLDDVKAYETQLKRLKNETDQLRKLVYEH
NT seq 498 nt   +upstreamnt  +downstreamnt
atgtctgtcatagtggacttgcggctgggcaactggaaagctcaacagcttataaattca
acaaaggaaaccactgccaaaacaaaacacgaggccgatacaattctgttggatattcag
aatatctactaccagcataaacatctgaaccgagaaattgaccagtgcgaaagttttgtc
tctaagcatgaacaactggatctagtccccttagaacagtttttagaagagaacccacat
ctgaaggaggaacatgacaaaaacccggcatctcgtaatgtaaatcatatgatcactcta
gaacgacttaaagacgaagaaaagcgacgactggaacttttcgtcaccaaaaccagactt
catgaaacacgcaacaaattgaatcttgaaatcaagtcgctgcgcgatggtttggatgat
gtcaaggcctatgagacacaactcaaacgtctgaaaaatgagaccgaccagctgcgcaag
ctcgtttatgagcattga

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