KEGG   Sugiyamaella lignohabitans: AWJ20_5101
Entry
AWJ20_5101        CDS       T05270                                 
Symbol
TAF5
Name
(RefSeq) Taf5p
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AWJ20_5101 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slb03021]
    AWJ20_5101 (TAF5)
   03036 Chromosome and associated proteins [BR:slb03036]
    AWJ20_5101 (TAF5)
Transcription machinery [BR:slb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     AWJ20_5101 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     AWJ20_5101 (TAF5)
Chromosome and associated proteins [BR:slb03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     AWJ20_5101 (TAF5)
    STAGA complex
     AWJ20_5101 (TAF5)
    TFTC complex
     AWJ20_5101 (TAF5)
    SAGA complex
     AWJ20_5101 (TAF5)
    SLIK complex
     AWJ20_5101 (TAF5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_2nd Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 TFIID_NTD2 WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st CFAP251_N Beta-prop_Aladin NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st DSE1_N Beta-prop_VPS8 Beta-prop_WDR41 ANAPC4_WD40 PAC11 Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_SCAP LisH Beta-prop_RIG_2nd Beta-prop_DCAF4 ASA1 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Nup120_160 WD40_RFWD3 Tricorn_2nd E2-ntca
Other DBs
NCBI-GeneID: 30037307
NCBI-ProteinID: XP_018736620
UniProt: A0A167EJ71
LinkDB
Position
D:1521156..1523582
AA seq 808 aa
MVPPPVTPGQGGPQTPVNNVGTPVAGGQGQPVRPMVNSAGQNGAVAGGTAGAGGAVRPPG
TPTAGPAGGAGAPGQPPQPGQPLPLVDLNRIVLEYLNKKGYSRTEAMLRMESSRIPAPPA
NNVGPNGGVRTGPMGRPGQQTPDMGAAGAAGTGKPVIAAPSEPPEAYVAAYRALKNWTDR
SLDLYRPELRRILYPVFVHIFLELISKDHGAIAKDFFDEYSQDQAVVHSQDIEKLSAISL
PSHVKENELAKAFLEQEYKLTVSRTSLDLLLYFVYEIEQSGGSIIIRLLNQYMDIQVTSA
RPSITDTESVLNPDEGLIGIHGTGRGTGQSTSGGGSGGSGGAGGAAAVAAQQSQIDSFNS
QPLKLGHLPMDADFQKDVTTALEEKDKQLAASGDEAANAAVGTTGYKTLSEEFAAQIKQQ
ESESGKNAPTRESLPLPKYKSVDVELEVKKIIDSRAKIHLGTTQTPLPSVCMYTFHNTHD
GLNCLDFSDDSSLVAGGFSDSFVKVWSLKGDKLSSVVKDDVPSTSKRLIGHSGPVFGTSF
SSDNRYLLSCSEDNTARLWSLDTYSALVSYKGHNHPVWDVKFGPYNHYFATASHDHTARL
WSCDHIYPLRIFAGHLSDVDTVSFHPNGTYVFTGSSDKTCRMWDINKGSAVRVFIGHTGA
VNTTAVSPDGRWLATAGEDSVINVWDIGSGRRLKSMKGHGRTSIYSLAFSRDGAVLVSGG
ADHSVRTWDIRKGTHDGGPEPEVFKNESKTANIPDPSTADPASGDRKKTKEVVATSDHLA
VYHTKRTPVYKVAFTRRNLCLAGGAFSN
NT seq 2427 nt   +upstreamnt  +downstreamnt
atggtccctcctccggtgacgccaggtcagggcggtcctcaaacgccggtgaataatgtt
ggtacgcctgtagcaggcggtcagggtcagcctgtgcggcctatggttaattcggcaggc
cagaatggagcagtggctggcggaacagcaggtgctggtggtgcagtgagacctccaggg
actcctacagcaggtccagctggtggtgctggagcacctggtcagcctccacaacctggt
caacctttaccattggttgatcttaatcgaattgtactggaatatctgaataagaaaggt
tattcacggacagaagccatgcttcgaatggaatcgtcgagaattcccgctcctcctgct
aataatgtcggtcctaatggcggtgtaaggaccggtcctatgggcagaccaggccaacaa
actcctgatatgggtgctgctggtgctgctggaactggaaaacctgtcattgcagctcct
tcggaaccaccagaggcatatgttgccgcgtatcgagcgcttaagaactggacagatcgg
tcgctcgatttatacagaccagaattgcgacgcattttgtacccggtctttgtccacatt
ttcctagaactcattagtaaagaccatggagcaattgctaaggacttttttgacgagtat
tcacaggaccaggctgtcgttcattcacaagatattgaaaaactgtctgccatttcacta
ccttcacatgttaaagagaacgagctagcaaaagcgtttcttgaacaagaatataaatta
acagtatcacgcacgtcgcttgacttgctgctgtattttgtatatgagattgaacaatct
ggaggatcgattattatccgattgcttaatcagtatatggatatccaagttacaagtgct
cgacccagcatcactgacacagaaagtgtactaaacccagacgaaggacttattggaatc
catggaaccggtcgtggcactggacaaagtacttcgggtggtggcagtggtggttctggt
ggagctggtggtgccgcagcagttgctgctcaacagagccaaatcgactcgttcaattca
caacctctgaaattaggacacttaccaatggatgcggattttcagaaagatgtgactaca
gctttggaagagaaagataaacaactggctgcgtcgggtgacgaagctgctaatgctgct
gtaggaactacgggatataagactctgagtgaagagtttgcagcacaaatcaagcaacaa
gaatcagaatcaggtaagaacgcaccaacaagagaatcgttgccattaccaaagtataaa
tcagtggatgtcgagctggaagtcaaaaaaatcattgactcaagagccaagatccatctc
ggcaccactcagacgcctctacccagtgtgtgtatgtatacattccacaatacacacgac
ggactcaactgtctggacttttccgacgattcgagtctggtagcaggtggtttttccgac
agttttgtaaaagtatggtcattaaagggagacaagttatcgagtgtggttaaagacgat
gttcctagtaccagcaaacggcttattggccattcgggtcctgtatttggcacctcgttc
agttcggataatcgatatttactttcatgttcggaagataacactgccagactatggtcc
ttggatacttattcggccttggtgtcgtataaaggacataaccacccagtgtgggacgtg
aaattcgggccatataaccactatttcgctactgcgtcgcatgatcataccgcgagactg
tggtcgtgcgaccatatctacccactacggatcttcgctggtcacttgagtgatgtcgat
accgtgagtttccaccccaatggtacatatgtgtttactggttcgagcgataagacctgt
cgcatgtgggatattaataaaggaagtgctgttcgtgtatttatcggccatactggagcc
gtcaacacgacagctgtgtcgcctgatggtcgatggctggccactgctggtgaagacagt
gttattaatgtatgggatattgggtcaggacgacgactgaagagcatgaaaggacacggc
cgaacgtcaatctactcactggcgttttcccgcgacggagctgtgctcgtcagtgggggt
gccgaccactcggtgcgaacatgggatatccgcaagggtacacacgacggcgggcccgag
cccgaggtgttcaaaaacgaatccaaaacggccaacatccccgaccccagcaccgccgac
ccggcttctggcgaccgcaaaaagaccaaagaagtggtcgccacctcggaccatctcgcg
gtctaccacactaaacgcacccccgtctataaagtggccttcacgcgtcgcaacctctgc
ctcgccggcggggccttttccaactaa

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