Sugiyamaella lignohabitans: AWJ20_5131
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Entry
AWJ20_5131 CDS
T05270
Symbol
RCM1
Name
(RefSeq) Rcm1p
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_5131 (RCM1)
Enzymes [BR:
slb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
AWJ20_5131 (RCM1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
Other ribosome biogenesis factors
AWJ20_5131 (RCM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
Motif
Other DBs
NCBI-GeneID:
30037340
NCBI-ProteinID:
XP_018736649
UniProt:
A0A167EK62
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Position
D:complement(1617493..1618575)
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AA seq
360 aa
AA seq
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MMKVSGKDGLICGLLVDELTILAAPVRWIRRNNIKCQEDPLETFFSNYERVDTIDKLTSS
GKIFIDPHVPFLYGIHPSEKVSKMPPYQTGKIIIQDRASCFPATILNPKPGDILVDACSA
PGNKTTHLASFVQNTKNSITAFERDPKRAEILKKMVAMAGAGSCVKIKVGDFTECDPSSS
ELKDVTGLVVDPSCSGSGIFGRGFEEENNKEKDEQADKFRLHKLSNFQFKIVSHAMSFPS
AKTVVYSTCSIHAEENEQVVRKLLEDPDIRARGWTLRRKHGVLPNWHRRGWPAEFEGMDS
AEELAEGCVRALPKEDGGIGFFAACFDRVTTDGHSIGDPVEINGPSTQGEEDDEEWTGFD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagtaagtgggaaagatggattgatttgcgggttattggttgatgaactaacg
attttggcagcaccagttcgatggattcgcaggaataacataaaatgtcaagaggaccca
ttggagacctttttttcaaattatgaacgtgtcgatactatcgacaaactgactagttcc
ggcaagatatttatagatccacatgtgccctttttgtatggaattcatccatcagagaaa
gtatcaaaaatgcctccctatcaaacaggaaagatcatcatacaagacagagcttcttgc
tttccggcaacgattcttaaccccaagcctggtgatattcttgtggatgcttgttctgct
ccaggaaataagactactcatttggcctcattcgttcaaaatacgaaaaactccataact
gcattcgaaagagacccgaaacgagccgaaatcttgaagaaaatggtcgccatggccgga
gctggcagctgtgtcaaaatcaaagtaggcgattttacagaatgcgacccttctagttca
gaactcaaggatgttacaggactagttgtagatccatcatgttcagggtcaggcattttt
ggccgaggttttgaagaagagaataataaagagaaagatgagcaggctgataagtttcga
ctacacaaactatcaaattttcagtttaagattgtgtcacatgctatgagctttccctct
gccaagacagtggtgtattcaacctgctctatacacgcagaagaaaatgagcaggtggtt
agaaaactcctggaagaccctgatattagagctcgaggttggactttgagacgtaaacat
ggcgtgttacccaattggcatcgcagaggctggccagctgaatttgaaggcatggattct
gctgaggaactggcagaaggatgcgttcgtgctcttcccaaagaagacggcggcattggt
ttttttgcagcctgttttgatcgtgtcacaactgacggccatagtattggtgacccagtt
gaaataaatggcccgtctactcagggagaagaagacgacgaggagtggaccggatttgat
taa
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