Sugiyamaella lignohabitans: AWJ20_5133
Help
Entry
AWJ20_5133 CDS
T05270
Symbol
RRP46
Name
(RefSeq) Rrp46p
KO
K12590
exosome complex component RRP46
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWJ20_5133 (RRP46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_5133 (RRP46)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AWJ20_5133 (RRP46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
30037342
NCBI-ProteinID:
XP_018736651
UniProt:
A0A167EK80
LinkDB
All DBs
Position
D:1622000..1622683
Genome browser
AA seq
227 aa
AA seq
DB search
MTVTSTKPIASTGILPSVDGSAEWNYGQTKVICSVSGPMEVKIRDEIPNATTLELVVRPV
AGLSTTRETLIEDRLYCALSSVVLRHIHPRSLVQIVVQVMEAGESSKFVCRELAASINSS
NLALVDAGVPLQGLVVATSIAILNDDKHSLIVEPSHQDLEASVSSHVVAYEFVDKEPQRL
LLCESTGQFSEEEVYEVLERALEGCNTVYQSVRGTLEQKVSKDFVWR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaacgagcacgaaaccaattgcgtcaaccggcattctacctagtgtagacggt
tcagctgagtggaattatggacagacaaaggttatttgctcggtctctggtcctatggag
gtgaagattcgagacgagatcccgaatgctactactttagagctggttgtaaggccagta
gccggactttccactactcgtgagacactcatcgaggatagactttattgtgcgttgtca
tcggttgtactaagacatattcatcctcggtccctggtgcaaattgtggtacaagtcatg
gaggcaggcgaatcatcgaagtttgtttgccgagaactggcggccagtattaattcgtca
aatcttgctcttgttgatgctggagttcctttacaaggtcttgtagttgcgactagcatt
gccattttaaacgatgacaaacatagcttaatcgtagaaccttcgcaccaagatttggaa
gccagtgtttcgtcgcatgttgtcgcatacgagtttgtcgataaagagccacagcgcctc
ctcctgtgcgaaagcaccggtcagttcagtgaagaagaggtatacgaagtgcttgaaagg
gccttagaaggatgcaacactgtgtaccaatctgtgagaggcacattagaacagaaagtt
agtaaggactttgtgtggcggtaa
DBGET
integrated database retrieval system
