Sugiyamaella lignohabitans: AWJ20_5168
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Entry
AWJ20_5168 CDS
T05270
Symbol
SSC1
Name
(RefSeq) Hsp70 family ATPase SSC1
KO
K04043
molecular chaperone DnaK
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWJ20_5168 (SSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_5168 (SSC1)
03110 Chaperones and folding catalysts [BR:
slb03110
]
AWJ20_5168 (SSC1)
03029 Mitochondrial biogenesis [BR:
slb03029
]
AWJ20_5168 (SSC1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slb04147
]
AWJ20_5168 (SSC1)
Messenger RNA biogenesis [BR:
slb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AWJ20_5168 (SSC1)
Chaperones and folding catalysts [BR:
slb03110
]
Heat shock proteins
HSP70 / DNAK
AWJ20_5168 (SSC1)
Mitochondrial biogenesis [BR:
slb03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
AWJ20_5168 (SSC1)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
AWJ20_5168 (SSC1)
Exosome [BR:
slb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AWJ20_5168 (SSC1)
Exosomal proteins of breast cancer cells
AWJ20_5168 (SSC1)
Exosomal proteins of colorectal cancer cells
AWJ20_5168 (SSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
BcrAD_BadFG
TrmB-TrmBL1_EBD_C
Motif
Other DBs
NCBI-GeneID:
30037380
NCBI-ProteinID:
XP_018736684
UniProt:
A0A161HLI2
LinkDB
All DBs
Position
D:complement(1735763..1737736)
Genome browser
AA seq
657 aa
AA seq
DB search
MLAARFAARRGAATPRLATSTLMKRFNSNGKVQGSVIGIDLGTTNSAVAIMEGKIPKVIE
NSEGARTTPSVVAFTKEGERLVGVPAKRQAVVNPENTLFATKRLIGRRWEDKEVQKDLDQ
VPYKIVKHSNGDAWLEARGEKYSPAQIGGFVLNKMKETAEGYLGKTVKNAVVTVPAYFND
SQRQATKDAGQIVGLNVLRVVNEPTAAALAYGLDKTEDKVVAVFDLGGGTFDISILEIQK
GVFEVKSTNGDTHLGGEDFDIAIVRFLVDKFKQETGIDLSGDRMAIQRIREAAEKAKVEL
SSTVSTDINLPFITADASGPKHINVSISRSQFEGLVDGLIKKTIDPVKKALKDADMTSNN
INEVILVGGMSRMPKVIETVKSLFGREPNKSVNPDEAVAIGAAIQGAVLAGEVQDVLLLD
VTPLSLGIETLGGVFTRLINRNTTIPTRKGQVFSTAATGQTSVEIRVYQGERELVRDNKL
IGNFTLSGIPPAAKGVPQIEVTFDIDADGIINVSARDKGTNKDASITVAGSSGLSDSEIE
KMVNDAEKYKEQDMARKESVETANRADSICNEIDNSLSQYKDQLNKDDVDKLSVKITELR
ELVAKAQSGADAVSVEDLKAKTDEVQNESLDVFKKIYEDKARNNTSSTEEPKPEDKQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgttggctgctagatttgctgcccgtcgtggagctgccactcctcgtttggccacctct
actttgatgaagcgtttcaattcaaatggcaaggttcaaggatcagtaattggtattgat
ttgggtaccaccaactctgctgttgccatcatggagggtaagatccccaaggtcattgag
aactctgagggtgctcgtactactccttcggttgttgctttcaccaaagaaggtgaacgt
ttggtgggtgttcctgccaagcgtcaagccgttgtcaaccctgaaaacactttgtttgcc
accaagcgtttgattggtagaagatgggaagacaaggaggtccaaaaggatttggatcaa
gttccttacaagattgtcaagcactctaatggtgatgcttggttggaggccagaggtgag
aagtactcacctgctcaaattggaggtttcgttttgaacaagatgaaggagactgctgag
ggataccttggtaagaccgtcaagaatgccgttgtcactgttcctgcttacttcaacgac
tctcaacgtcaagctactaaggatgctggtcaaattgttggtttgaacgttttgcgtgtt
gtcaacgagcctactgccgctgctttggcttatggtttggacaagaccgaggacaaggtt
gttgccgtgttcgatttgggtggtggtactttcgatatctccatcttggagatccaaaag
ggtgttttcgaggtcaagtcgaccaatggtgatacccacttgggtggtgaggacttcgat
atcgccattgtccgattcttggtcgacaagttcaagcaagagactggtattgatctttcg
ggagaccgtatggccattcaacgtatccgtgaagctgccgagaaggccaaggtcgagttg
tcttctaccgtttctaccgatatcaacttgccatttatcactgccgatgcctctggtcct
aagcacatcaacgtttccatcagccgttctcaattcgagggattggttgacggattgatc
aagaagactattgaccctgttaagaaggctcttaaggatgccgacatgacttctaacaac
atcaacgaggttattcttgttggtggtatgtcgagaatgcccaaggtcattgagacagtt
aagagcttgttcggccgtgagcccaataagtcggtcaaccccgatgaggctgttgccatt
ggtgctgctattcaaggagctgttttggccggtgaggttcaagacgttcttttgctcgat
gtcactcctctttctcttggtattgagacccttggcggtgttttcactcgtttgatcaac
agaaacaccaccattcctacccgtaagggccaagtgttctccactgctgccaccggtcaa
acctctgttgagatccgtgtttaccaaggagagcgtgagcttgtccgtgataacaagttg
attggtaacttcactttgtctggaattcctcctgctgccaagggtgttcctcaaatcgag
gtcactttcgacattgacgctgacggaatcatcaacgtttctgcccgtgacaagggtacc
aacaaggacgcctcgatcaccgttgccggttcttctggattgtctgactctgagatcgag
aaaatggttaacgatgccgagaagtacaaggagcaagatatggcccgtaaggagtctgtt
gagactgctaaccgtgctgactccatctgcaacgagatcgataactccctttctcaatac
aaggaccaactcaacaaggacgatgttgacaagctcagtgtcaagatcaccgagctccgt
gagcttgttgccaaggcccaatccggtgccgacgccgtctctgtcgaggacttgaaggcc
aagaccgacgaggtccaaaacgagtcgctcgacgtgttcaagaagatctacgaagacaag
gcccgtaacaacacctcctccaccgaggagcccaagcccgaggacaagcaataa
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