Sugiyamaella lignohabitans: AWJ20_5179
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Entry
AWJ20_5179 CDS
T05270
Symbol
POM152
Name
(RefSeq) Pom152p
KO
K18725
nucleoporin POM152
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_5179 (POM152)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_5179 (POM152)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AWJ20_5179 (POM152)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_1
TMD_POM152
MIT_ATG1
Motif
Other DBs
NCBI-GeneID:
30037392
NCBI-ProteinID:
XP_018736695
UniProt:
A0A167ELI3
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All DBs
Position
D:1782485..1785379
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AA seq
964 aa
AA seq
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MSRRTSSKPWHNDAAGSSFSDPSAPTIIAAQTRKSTPILKKPSVASETSPLIPTVYLDVG
QQRLLFVSLFFGIQAYKISEAVGSTIGSEAFLLKYLIIDAMFVWVLPIFRIPWLTFSNWV
SFLQFILLIIFNIFLSTSSFSLSLLILAIWKSLFETEVSFSGSKVHQQDQVYDAKSHLLG
KYTVNILPESTALLNPGLASYCVDSGASNLPISIPVRLNATDPIFVQLARIDFETLEETT
YNFTRKELKSFKSSSPPANLIDEFEGLIEGIAGSGGSGSGAGSGAGSGSGSGGSGPGSGS
GSTSRSTASLSYLSLPVSKPGLYRLKQVTDASNLDVRLYRSDVLVVSCPKAYIIGSEASD
VSPDRCIGDVDTPKLVVDGVPPLRVKYSRSVKGRESLFSVQSLQPDHFTSPLLSGGATGS
RFVWSKGDSLDWVQAKTVEVDLDTTLSTTGQWVYDIDEVEDAFGNIINYSALLQSGKNSA
LLSSKGLSYGFAVHPRPQIRFQGCDSVNPVKLPKGHQVQLPVSLIADANDGPFEATFDYS
PLQDESNEYNNETSVFSHKFNSLGERLVISEPGIYSLREISGKYCSGDVIEPSSCLVFVP
PEPTVEIKFDDIEDKCAGPTGVRADISLTGNPPFSLSYRVIKDGRIISTKTHDISKSREQ
LMFNPSEEGNYVYEFFSLSDDLYKGRPLQGDHFKKSQSIHVLAGASFAEKSIHTRRCCSG
DSLKLKVDLNGIPPLKLNYEIVSGNSRKEQFSVSDINDMSYEIETPALTQGGRYTISLVS
VQDSRGCVTPLNEADIVVEVRRQRPAAAFLPIDGSTKVKTLEGRSIGLPLRLSGKAPWTV
SYKHIDEASGIEQDYVVNVGNANGDAIHTNQKGKYLITGVSDAYCPGDVSVESNTIDISW
INKPSLSVVSTPSLSKVADNLMSRKNVCELEEDVFEISLEGKLSNWRVITGICYAKSHGI
LTDI
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaagaacttcttccaagccctggcacaatgatgccgctggatcgagcttttca
gatccctcggctccaacaataattgctgctcaaactcggaaatcgactcccattcttaag
aaaccatcggtcgcttctgagacctcccctttaatcccgacggtgtatctcgatgttggt
caacagcgattgctatttgtcagtttatttttcggaatccaagcttataaaatttcagaa
gcagttggttcgacaattggcagtgaagcctttttactaaaatatttaattatagacgcc
atgtttgtgtgggttctgcctatattcagaatcccttggcttacattcagcaattgggtg
tcgtttttgcagttcatattgcttattattttcaacatttttcttagtaccagctcattc
tctttgagtcttttgattttggctatttggaaatctctatttgaaaccgaagtatcgttt
tcaggcagcaaagtccatcaacaggaccaggtttatgatgccaaatcccatcttctcggt
aaatatactgtaaatattcttcctgagagcactgctttgctcaatccaggactggcctcg
tactgcgttgactcgggtgcttccaatttaccaatctcgattcctgttcgtctcaatgct
actgatcctatttttgttcaattggccagaatcgattttgaaactctagaagaaactacc
tacaactttacaagaaaagaactcaagtcgtttaaaagcagcagtcctcctgctaatttg
attgatgagtttgaaggtctgattgagggaattgctggctctggcggcagtggtagtggt
gcggggtctggagcagggtctggctctggttctggtggatcgggtcctggctcgggatcc
ggttcgacttctaggtctactgcatcgctatcttatctcagtctgccagttagcaaaccc
ggcttgtatagattgaagcaagtaacggatgcatccaatcttgacgtaagactatatcgt
tcagatgtgttggtggtatcgtgtccaaaggcatatatcattggtagtgaagctagtgat
gttagtcctgataggtgtattggagatgtggacacacccaagcttgtagtagatggtgtt
ccacctctgcgagtcaaatacagtcgatctgttaaaggaagagagtctttattttctgtc
caatctttgcaacctgaccattttacctctcctctgttatcaggcggtgcaactggcagt
cgatttgtttggtcgaaaggagactcgttagattgggtacaagcaaagactgttgaggtc
gatttggataccactttgtctacaactggtcaatgggtatatgacatcgacgaggtagaa
gacgctttcggtaatatcatcaactattctgcccttctgcaaagcgggaagaattctgct
ctcttgtcatccaagggtctttcttatggctttgcagtgcatcctcgacctcaaatcaga
ttccaaggctgtgattctgtcaaccccgtcaaacttccaaaaggacatcaggtccaatta
cctgtaagcttgattgctgatgctaatgacggtccgtttgaagcaactttcgactactct
cctttgcaggatgaatctaatgagtataacaacgaaacttcggtctttagtcacaaattc
aactctcttggcgagagacttgtaatcagtgaaccaggtatttattctcttagagagata
tctggcaagtattgttctggagacgtcatcgaaccttcttcgtgtcttgtttttgtgcct
cctgaaccaactgtggaaataaaattcgatgacattgaagacaagtgtgctgggcccact
ggtgtccgtgctgatatcagtttgactggtaaccctccattttcactttcctacagagtt
atcaaggatggaagaatcatttctacaaagacccatgatattagcaagagtcgagagcaa
ctcatgttcaatccttctgaagagggcaattatgtttatgaattctttagtctttctgat
gacttgtacaaaggtagacctttgcaaggagatcatttcaagaagagccaatcaattcat
gttcttgctggtgcctcatttgccgaaaagtctatccacaccagaagatgctgctcaggc
gattcgcttaagttgaaggtagatttgaatggtattccacctctgaaattgaactacgaa
attgtgtcaggaaattctcgtaaggagcagttctctgtcagcgatattaacgacatgagc
tatgagattgaaacacctgcacttacccagggtggtagatacaccatttcgctcgtttct
gttcaagacagccgtggttgcgtaacaccattaaatgaagctgatattgtcgttgaagtg
agaagacagcgtcctgctgcagccttcttgcctattgatggcagcacgaaagtcaaaact
ttagaaggcagatcaattggactcccacttcgtttaagcggcaaagctccatggactgta
tcttataaacatatcgacgaggcatcaggaatcgagcaggattacgttgtgaacgttgga
aacgccaatggtgacgccatccataccaaccagaagggcaaatacctaatcactggtgtc
tctgatgcctactgtccaggagatgtatcagtcgaaagcaacacgattgatatttcgtgg
ataaacaaacctagtctctccgtcgtgtcaacaccgtcactatcaaaggttgcagataac
ctgatgtcccgtaagaatgtgtgcgaactggaagaggatgtatttgagattagtttagag
ggtaagttaagcaattggagagtgataactggaatttgttatgcaaaaagtcatggaata
ctaactgatatttag
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