KEGG   Sugiyamaella lignohabitans: AWJ20_5219
Entry
AWJ20_5219        CDS       T05270                                 
Symbol
PRP40
Name
(RefSeq) Prp40p
  KO
K12821  pre-mRNA-processing factor 40
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AWJ20_5219 (PRP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slb03041]
    AWJ20_5219 (PRP40)
Spliceosome [BR:slb03041]
 Complex A
  U1 snRNP components
   U1 related factors
    AWJ20_5219 (PRP40)
 Complex B
    AWJ20_5219 (PRP40)
SSDB
Motif
Pfam: FF WW WW_TCERG1
Other DBs
NCBI-GeneID: 30037437
NCBI-ProteinID: XP_018736734
UniProt: A0A161HLJ9
LinkDB
Position
D:1915556..1918030
AA seq 824 aa
MAWEPHQDDQGRVYYYNSVTRQSTWEKPDELLTPLEIALKRTGWTEYETDDGAKYWNNDA
SGESVWELPEDIKKLEDEIKNKRSEDRTELANLPVGPSAANRIPAGIVSGGAPGAGISVS
GTSVSGASGVSQIPLSSNNKFPSQSAVHPDRVEYLRKNLEGQDPMQAAVEEYRNALRRAG
VDKIWSNPEAGDNQEETHEKENQNGSRNDDRDRQNEDDRNGSGYREDREGRERRDGRERT
NGSGERTRKSHMKSLKEQVFARPTFMPWNEAVKVLITDPGYWVIRDPADRRKHFDEFISE
VTNKYQTERLEQWTSVIKSMSDVLANGKYSRRIKYYSTWATFKDDLNREAPFQQALEYFP
GDFGSRLQRFVFHKRLQELRKQRNADVEASKTQELRVLRDQFSKLRVDYSSRWEDVFSSL
QKSGVLSAKIHHLDNLDILEGYEEYMKTIEREENEKLRDLKKLRYRQERKNRQNFILLLQ
ELKQKGQLNVHSKWAKENDDDTKAIFPLIKDDPRYINLCGQPGSTPLELFWDTIEEEKRK
INLNRELVIDIISATRSNMPTSLEEFEQLLKSDPRGGQIPAELLQDVYKSLKEKGIDYSS
SSLSRRDHDTDRIRGRERSRDRDRDRDHGRNRDRDRDRDRGGEYDSYAKSSSRRDRSRSR
EHRSHSHRDRDAHDRDHERSYSRRDRSRSRSRSSYSRSRRESRSHSQSHHSDDDRFRAAR
SHKRHTMDFYDALDALRPRIVLEDTWKTIQPRVESLPEYKPLDESECRSIFDSYLRRLER
ANAPRPPPPRRDRHQRDLERVSHNEDLRNRPSGRGLDSGPILDY
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggcctgggaaccgcatcaagatgaccagggcagagtctactattacaattcagtgacg
cggcagagtacttgggagaagccagatgagctacttactccgctcgagatagcccttaag
agaacgggatggaccgagtatgagactgatgatggcgccaaatactggaataatgacgct
tctggtgagagtgtgtgggaactgccagaggatatcaagaaactggaagacgagatcaaa
aacaaacgcagtgaagatcgcacagagttggcaaatctgccggtaggaccaagtgctgct
aatagaatcccagctggaattgttagtggtggtgctccaggtgctggaatttctgtcagt
ggtacaagtgtatcaggtgcgtcaggtgtctcgcagattccattgtcttcaaataataaa
tttccgagccagagtgctgttcatccagacagagtcgaatatctgcgcaagaatctcgag
ggtcaagatcccatgcaagcagctgtagaggagtatcgaaacgcattgagaagagcaggt
gttgacaagatttggtcaaatcctgaagctggtgacaaccaggaagaaactcacgaaaag
gaaaaccagaatggttcacgaaacgacgaccgcgaccgacaaaacgaagatgatagaaat
ggaagtggttatagggaagacagagaaggaagagagagacgcgatggacgagaaagaaca
aatggctcgggagagagaacaagaaagagccatatgaaaagtttgaaggagcaggtgttt
gctcgtcctacttttatgccctggaacgaggccgtgaaagtcctcatcacggatcctgga
tactgggtgattcgtgatccagcagaccgtagaaagcattttgacgagttcatcagcgaa
gtcactaataaataccagactgaacgtctggaacagtggacctcggtgataaaaagcatg
tctgacgtactagcaaatggtaagtacagtcgtagaatcaagtactattcgacatgggcc
acttttaaagatgatctgaatcgagaagcgccattccaacaagctctcgagtactttcca
ggagatttcgggtcgagactccagcgatttgtatttcataaacgattgcaagaacttcgc
aagcagcgaaatgcggacgtagaagctagtaaaacccaagaattacgagtactccgagat
cagttctcaaaactacgtgtcgactacagctcacgttgggaagatgtgtttagttctcta
caaaaaagtggtgttttatccgcaaaaatacaccatcttgataatctcgatattctcgag
ggttatgaggagtatatgaagactattgaaagagaagaaaatgaaaagctacgagacttg
aagaaacttcggtatagacaagaacgaaagaatcgtcaaaacttcattctattgttacaa
gaattaaaacaaaaaggccagctcaatgtgcattccaagtgggcaaaagagaatgatgac
gatacaaaagccattttcccacttatcaaggacgacccccggtatattaatttgtgtggt
cagcctggatccacacctctagagctgttctgggatacaattgaagaagaaaaacgtaaa
atcaacctcaaccgagaactcgttattgatattatatcagccactcgaagcaatatgccc
acttcactcgaagaattcgaacaacttctgaaatccgatcctcgtggtggccagatccct
gctgaactgctgcaggacgtttataagagcttgaaagaaaagggtatcgactattcttct
tcatccctctctcgacgagatcacgatactgatcggattcgtggtcgggaacggtcacga
gaccgcgatcgtgatcgtgaccacggcagaaacagagatcgtgatcgtgaccgtgaccgt
ggaggagaatatgattcttatgcgaaatcgtcgtctcgcagagataggtcacgatctcga
gaacaccgttcacattcgcatcgagaccgcgatgcgcatgaccgggaccacgagcggtca
tattcacgtcgtgaccggtctcggtctcggtcccgtagcagctactcacgatcacgtcgc
gagtctagatcacactcacaatcccaccactcggacgacgaccgattccgagctgctcga
agtcacaaacgacacaccatggatttctacgacgctctcgatgctctacgaccgagaatt
gtcctggaagatacctggaaaaccatccagccccgtgtcgaatcgctgcctgaatacaaa
ccactcgacgaatccgaatgccgcagcatcttcgactcgtacctccgtcgtctcgaacga
gccaacgcaccacgaccacctccacctcgccgagaccgtcaccaacgagacctcgaacgc
gtgtcccacaacgaagacctccgcaaccggccctcgggccgcggtctcgacagcggaccc
atcctcgactactaa

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