Sugiyamaella lignohabitans: AWJ20_549
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Entry
AWJ20_549 CDS
T05270
Symbol
TIF1
Name
(RefSeq) translation initiation factor eIF4A
KO
K03257
translation initiation factor 4A
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_549 (TIF1)
03012 Translation factors [BR:
slb03012
]
AWJ20_549 (TIF1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slb04147
]
AWJ20_549 (TIF1)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AWJ20_549 (TIF1)
mRNA cycle factors
Stress granule specific factors
AWJ20_549 (TIF1)
Translation factors [BR:
slb03012
]
Eukaryotic type
Initiation factors
eIF-4
AWJ20_549 (TIF1)
Exosome [BR:
slb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AWJ20_549 (TIF1)
Exosomal proteins of bladder cancer cells
AWJ20_549 (TIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
30037593
NCBI-ProteinID:
XP_018734777
UniProt:
A0A167CZQ7
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All DBs
Position
A:1764309..1765496
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AA seq
395 aa
AA seq
DB search
MSEGLADIEAEQIVTNYDEVVDSFDALNLKEPLLRGIFAHGFETPSSIQQRAILPVIKKH
DVLAQSQSGTGKTATFSIATLQNIDTNIKATQALILAPTRELALQIQKVVLALGDFLKVN
CHACIGGTNIQEDIQMLREGAQVIVGTPGRVLDMITRRHLRTDKIKMFVLDEADEMLSRG
FKSQIYDIFQNLPTDIQVVLLSATMPSSVLEVTTKFMRDPIRILVKKDELTLEGIKQFYI
DVGEEQFKIDVLIDLYETITVTQAVIFCNTRRKVEYVQQALTEKDFTVSAMHGDMDQAQR
DTIMQEFRTGSTRILISTDLLARGIDVQQVSLVINFDLPTNQENYIHRIGRGGRFGRKGV
AINFVTSEDIDAMREIEMFYSTQIEEMPMNIADLI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagggactcgctgatatcgaagctgaacaaattgtcaccaactacgacgaggtt
gtcgactctttcgatgctcttaaccttaaggagcctcttttgagaggtatttttgcccac
ggtttcgaaaccccttcttctattcaacaacgtgccattttgcccgttatcaagaagcac
gatgttcttgctcaatctcaatctggtactggtaagaccgccactttctccattgccact
ttacaaaacattgataccaacatcaaggccacccaagctcttatcttggctcctacccgt
gagttggctttgcaaatccaaaaggtcgttttggcccttggtgacttccttaaggtcaac
tgtcacgcctgtattggtggtaccaacatccaagaggacattcaaatgctccgtgagggt
gcccaagttatcgttggtactcccggtcgtgttcttgatatgattactcgtagacacctc
cgtaccgacaagatcaagatgttcgttcttgatgaggccgatgagatgttgtcccgtggt
ttcaagtctcaaatctacgacattttccaaaacttgcccactgacatccaggtcgtcctt
ttgtctgccaccatgcccagctctgttttggaggtcaccaccaagttcatgcgtgacccc
atccgtatccttgtcaagaaggatgagttgactttggaaggtatcaagcaattctacatt
gacgttggtgaggagcaattcaagatcgatgttttgattgatctttacgagactatcact
gtcacccaagccgttatcttctgtaacaccagaagaaaggtcgagtacgtccaacaagct
cttaccgagaaggatttcactgtctctgccatgcacggtgatatggaccaagctcaacgt
gacaccatcatgcaagagttccgtaccggatccacccgtatccttatctcgaccgatttg
cttgcccgtggtatcgacgttcaacaagtttcgctcgttatcaacttcgatctccccacc
aaccaagagaactacattcaccgtatcggtcgtggtggtcgtttcggtcgtaagggtgtt
gctatcaactttgtcacctctgaggatattgatgccatgagagagatcgagatgttctac
tccactcaaatcgaggagatgcccatgaacattgctgacctcatctaa
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