Sugiyamaella lignohabitans: AWJ20_624
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Entry
AWJ20_624 CDS
T05270
Symbol
RAD4
Name
(RefSeq) Rad4p
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWJ20_624 (RAD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_624 (RAD4)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
AWJ20_624 (RAD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
30037677
NCBI-ProteinID:
XP_018734850
UniProt:
A0A167D1R9
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Position
A:complement(2008079..2011042)
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AA seq
987 aa
AA seq
DB search
MKRSKGKAPVRPKGSNLSRLGPQSVLSSVPKGYLAMMKDIQTEVKSIDDSRPVKKRKRQR
DQVGDRVDLDSANDSEVVYISSDSLEDPDERHPTSETQKHYYTNSIQLIEGNQDDDEDED
EDEEEEFEWDDVNLLNADTGVADTAEINSNGGDANNSVVGTSKEASSTQGITISLNAKET
KLTSKSRKVHHLTKEEKADRILIHKLQLICLLHHNSLRNHWCNDFLLHRDFKRVLSNNIL
QELFPPDHLSPTLKTRKFLDGLRHACKAWSNSFRITHKGLRMLGWDEIFNKSRLIESRMG
IEKFRRQLTRFRGSSDLSAQGFCALLRSVDVDARLVCSLQPLDFTSNTPMEESAESSDKD
TSRAGSPSSRHPSTFHQGSAYPIYWVEAWDPASSRWVSVDPTVTQSVEVVRGRSKLEPAL
SDPYNSLRYVIAFERDGTARDVTRRYAYQYNSKTRKKRITNTESGAVWWERVMRYFTPRQ
LDPRAIAEIAELKKREASEGLPTNIQDFKGHPIYVLEQHLRQNEVLDPKVPCGTLALKHT
KKIQRGSFEAYVGGKTCPVYHRKHVKIVRSAQSWYRLGRVVKAGSQPLKHTKARKSLSSK
YSDTEDAGEEEANVGMYSLDQTTKYVPPPIVDGKVPRNAFRNIDVYVPSMIPEGGRHLRY
PNINLAAKILGVDYADAVCGFDFARRKMNPRIEGIVIAAEFEEAVMEVYNHLVYEKEEED
KKVVEAKALLRWKRYLIALQIKSRLNRVHGKLEEESIPKADGSGSDSDVVVSEVNTTPAP
KGRFDLSDIDVEKLLATGRLAPASSSVDNESSNEFSFTVLHQLDGNNIESAIVVSSRENS
VEAEPTSHVRSTNMVSRSNGEVVSASETQQLEDDTETQPVTEIPQNAERLSDSPKSTNFY
NGGVQDAKFSTSNQFSMATVADETQLTEETQLTSLVETQITEETQQTSFVETQDLTKSDD
DSSGGFMAESMSESELLAELDEEMDSS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcaaagggaaaggctccggtaaggcccaaagggtcgaatctttccaggctt
gggcctcaatcggtactaagtagtgtgccaaagggatatcttgctatgatgaaagatatc
caaaccgaagttaaaagcattgacgacagtaggccagtaaaaaaaagaaagcgtcaaaga
gaccaagtaggggatcgggtcgatttggattcagctaatgactctgaagtagtatacatc
tcctcggattctttagaagacccagacgaacggcatccgacatcagaaacgcagaaacat
tactacacaaattcgatccaactgatcgaaggtaatcaggatgatgatgaagatgaagat
gaagatgaagaagaagaatttgagtgggacgatgtaaatcttttgaatgctgatacggga
gtagcagacacagcagaaataaactccaatggtggcgatgcgaataattctgtcgtaggc
acgtcaaaggaagcaagttcgactcaaggaattaccatatccttgaatgccaaagaaacc
aagttaacttcgaaaagtcgcaaagtacatcatttgacaaaagaggaaaaagctgacaga
attttgattcataaactccagcttatctgcctcctacaccacaactctctccgtaatcac
tggtgcaatgattttctccttcatagggacttcaaaagggtattaagtaataatattcta
caggagctatttccaccagaccatttatctcccactttaaaaactcgaaaatttctagac
gggctacgccatgcttgtaaggcatggagtaacagtttccgtatcacacacaaggggttg
agaatgctcggctgggatgaaatatttaacaagtctcgactgattgagagccgaatgggt
atagaaaaatttagaaggcaattgactagatttagagggtctagtgatttatccgctcaa
ggattttgtgctcttttgagatcagtggatgtggatgccaggcttgtctgctcccttcaa
ccactggattttacatctaatacacctatggaagagtcagcagaatcgtcagataaggat
acctctcgagctggaagtcctagttccaggcacccctcgacatttcatcagggcagtgct
taccccatttattgggtagaggcatgggatccagccagctcaaggtgggtatcggtagat
ccaacagtaacacaatcggtggaagttgttcgaggaaggtcaaaactggaacctgctttg
tcagacccatacaactctctccgatatgtcattgcatttgaacgcgatggcactgctcgc
gatgtgacaagacgttatgcctatcaatacaactccaaaacgaggaaaaagcgaataaca
aataccgaatcaggtgcggtatggtgggagcgagttatgcgatactttacacctcgtcag
ctggacccaagagctatcgctgaaattgcggaacttaaaaaacgggaagcatccgaagga
ctaccaacgaatatacaggacttcaagggtcatcctatatatgttttggaacaacacttg
cgtcaaaatgaggttctcgacccgaaagttccttgtgggacactagccttgaaacacacc
aagaaaatccaaagaggatcttttgaagcgtatgtgggtggaaaaacatgtcctgtttat
cataggaagcatgttaaaatagttcgttcagcccaatcctggtatagacttggtcgtgta
gtcaaagctggcagtcagcctcttaaacatacaaaagccaggaagagtctcagctctaaa
tatagcgatacagaagatgcaggtgaagaggaggcaaatgtcggaatgtattcacttgat
cagaccaccaagtacgtacctccaccaattgtagatgggaaagtgccgagaaatgcattt
cgcaacatcgacgtttacgtgccatctatgataccagagggaggccgacatttaaggtat
cccaatattaacttggcggctaaaatccttggggttgactatgctgatgctgtttgcggg
tttgactttgctcgtagaaaaatgaatccgagaatcgaggggatagtcattgcagccgag
tttgaagaagctgtaatggaagtctataaccatctggtgtatgagaaggaagaagaggat
aaaaaggtagttgaagccaaagcattgctgagatggaagcggtacctgattgcattacag
ataaagagcaggttgaatagagtccacggaaagttagaagaagagtcgataccaaaggcc
gatggtagtggatctgatagcgatgtcgttgtttcagaagtaaacaccacaccggcgcca
aaaggtagatttgacctatccgatattgatgtcgagaagcttcttgctactgggaggctt
gcccctgcaagctcatcggtagacaatgagagcagtaatgaattttcatttactgtatta
catcagttagatggcaataatattgaaagtgcaattgtggtgtctagccgggaaaactca
gttgaagcggaaccaacttctcacgtacgttccacaaatatggtcagtcgctcgaacggt
gaggttgtcagcgcttctgaaactcaacagctggaagatgacactgaaactcagccagta
actgaaatacctcagaatgctgagcgactttcagattcccccaaatccacgaatttttac
aatggtggtgtacaggatgccaagttttcaacatctaaccagttttcaatggcaactgtt
gctgacgaaacacagttgacagaagagactcaactgacgtctttggtagaaacacagatt
actgaggagactcaacagacatcttttgtagaaacacaggatctgaccaaaagcgacgac
gacagcagtggagggttcatggccgagtcaatgagcgagtccgagcttctcgctgaacta
gacgaggaaatggactcgtcctga
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