Sugiyamaella lignohabitans: AWJ20_670
Help
Entry
AWJ20_670 CDS
T05270
Symbol
YTH1
Name
(RefSeq) Yth1p
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AWJ20_670 (YTH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_670 (YTH1)
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_670 (YTH1)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AWJ20_670 (YTH1)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AWJ20_670 (YTH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
30037728
NCBI-ProteinID:
XP_018734894
UniProt:
A0A161HIN8
LinkDB
All DBs
Position
A:complement(2124291..2124662)
Genome browser
AA seq
123 aa
AA seq
DB search
MAELLERSSRLPPEAWLPSQRMIRSVTNRLFRNGYCTQSPDCLYLHIDPQSKIPPCPNYD
RGFCRLGPECPRRHVTRVFCPKYLTGFCPEGPTCSMGHPRFVGITDDMRIAKEYDPLPSW
KRQ
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactcctcgagcgaagctcgaggttgccgccggaggcatggctgccatcacag
agaatgatcagatcagttactaacaggcttttcagaaatggatactgtacacaatcaccc
gattgtctctatcttcatattgatccacagagcaagatcccgccatgtcctaattacgac
cgtggtttctgtagactgggtcccgagtgtcctcgaaggcacgttaccagggttttctgt
cctaaatacctgacaggattctgtcccgaaggtcctacttgtagtatgggccatccacga
tttgtgggtattacggacgacatgcggattgctaaagaatacgacccactgccgagctgg
aaacggcagtga
DBGET
integrated database retrieval system