KEGG   Sugiyamaella lignohabitans: AWJ20_677
Entry
AWJ20_677         CDS       T05270                                 
Symbol
IKI3
Name
(RefSeq) Elongator subunit IKI3
  KO
K11373  elongator complex protein 1
Organism
slb  Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:slb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slb03016]
    AWJ20_677 (IKI3)
Transfer RNA biogenesis [BR:slb03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    AWJ20_677 (IKI3)
SSDB
Motif
Pfam: Beta-prop_ELP1_1st Beta-prop_ELP1_2nd A-sol_ELP1 TPR_ELP1 HB_ELP1 TPR_GEMI5 Nic96
Other DBs
NCBI-GeneID: 30037735
NCBI-ProteinID: XP_018734901
UniProt: A0A167D378
LinkDB
Position
A:complement(join(2147693..2151715,2151940..2152083))
AA seq 1388 aa
MRNLVTAHRGVLTVRSETVPDLPLAWSEFDPFADTMICTYGPSADFRNVSVFASWELPQE
ENENEEVIKVLSSKYFSDTDNVVLVLSNGDLINVTGVASYSSAADGESVTPGIDSGEEAI
VEIVGSIDDGVTDAAWSPDEEILSIVTSKSVILLSRVFESIAEASIQKDDLKISKHVSVG
WGKKETQFEGKGAKALRDPTMPAKVDSGVAVESDSGQFTRISWRGDGEFVAVSTIDEVEG
GLRRRTVRVYGRDGSLNSVSEPVDWLEGEISWRPSGNLIAGVQNKPSGQDLVFFERNGLR
RGEFSLRRENLTAVGGASSGEHTSTAPPTEISHAPAVKGLAWNIDSDVLAVVFENTVQLW
TVSNYAWHLKQEILPRGGHEGHIKWIRWHPEKPLSLLVCYEIESGCVFRLETHTLLWSLI
SGPSQQPNDLGTTVILDGSDIKITPLKIANTPPPMAFRTCTIDKNETVLHAAVNNTNDTL
AILTRSRILIAEWNLSAEGRKVKTPQIVKEIPLLAVLPDDTVPKQLAFINNLVAIVVDEV
VGSTMVVLELVNEIDENDETQLEYSVAAVHNIVPDVFILKTQSDYGAFVFETVDAKVHRL
SPYDLEVIEADIARFPERCIAFEVDSGVSEAIEVEQKAVDYENDDIEASGPVAVFATPTA
YGLSGKGRLYANQKQLSGSVTSLTISESHVIFTTAQHYLKFCHLSADVDEITVPSDEDQQ
SDERCRSIERGSLIVSVIPSKTALILQAPRGNLETIHPRIMVLSEVRRNIDAIRYDLAFK
SCRVHRIDLNLLHDYSPQTFYDNLDTFVDQLASVEYIDLFLSGLKEADVSQTMYKETITE
GIAKLKLDDQEAETAAPVVSGGPNATGSSATGESNKVNRICDALISVLDTPDRRTTYLQS
ILTAHACKSPPDLEAALLLAKELFPSKKPNSGSEVKSSTTNLAETAVQHLCFLQDVELLY
RTALGLYDLELTLLVAQQSQKDPKEYLPFLQNIQLQTPLRGKFLIDTHLKRYEKALLHLS
QLGEEAFDELLDYVVEHQLYKPALSIYKYDAGKQDQILELYASFLQGQTNYSEAALAYEA
LGKFEDAVDVYQLSGDWSAALAILSEHKSLFNEDKLIETAQHLGELAYDAHQYQAAATIQ
LDYLKDIKEAARILCKGHLYDEAIRVVTLHNHPEYLELIIDSGLLEGFGQISELVSDCKS
QVKSQVNRIRELRTKKAADPLGFFGGGPEDDTPDNVSIAPTESSTAPSFFTRYTGKTAGT
AQTGASRRTAKNKRREERKRARGKKGSVYEEEYLVNSMGRLIDRLHETQPEATRLIEGLI
RRKMRSHAYQVQAMFVQVLQDVSDVVEEIFTLSEKDRERYDDDGNVYYLDPLPLPVIKPF
PTKHMLDF
NT seq 4167 nt   +upstreamnt  +downstreamnt
atgcgcaatttagtgacggcgcaccgtggagtactcaccgtacgctcggaaaccgtgccc
gaccttccgctagcatggtccgaattcgatccattcgctgacaccatgatttgcacctac
ggtccaagtgctgacttccgaaatgtatcagtatttgcatcttgggaacttccacaagaa
gaaaatgagaatgaggaggtgattaaagtgctttcttccaagtatttttccgatacggat
aacgtggttttggtgctatctaatggcgatttgattaatgtgactggagttgctagctac
tcatcagctgctgatggtgagagtgttacaccaggaattgacagtggtgaagaagccatt
gtggagattgtagggtcaattgacgatggagtgactgatgccgcttggagtcctgatgag
gagattctcagtattgtgacaagcaagtcagtgattctgctaagtcgtgttttcgagtca
attgcagaggcttcgattcaaaaagacgatttaaagatttcaaagcatgtgtcagttgga
tggggtaaaaaggagacccagtttgagggaaagggagccaaggctttgcgagatcccacc
atgccggccaaggttgactctggtgttgctgtagagagtgactctggtcagttcacgagg
ataagttggagaggcgatggtgaatttgtggcagttagcaccattgatgaggttgaaggt
ggtttaagaagacgtactgttcgagtttatggccgggatggatcattaaatagcgtctca
gagccagtggactggctcgagggggagatttcttggagaccatcaggaaatcttatcgca
ggtgtacagaataagccgtctggtcaggatctagtattttttgagagaaatggtttgaga
agaggagagttctcattgagaagagagaatctcacggccgtgggtggagctagttctggc
gaacatacaagtactgctcctccaacagaaatatcacatgcgcctgctgttaaagggctt
gcgtggaatattgattcagatgtgttggcagtggtgtttgagaatacagttcagttgtgg
acagttagcaactatgcttggcatttgaagcaggagatcctgcctcgaggtggccatgaa
gggcatataaagtggatcagatggcatcctgagaagccattgagtttgcttgtgtgctat
gaaatcgaatcaggttgtgttttccgattagaaacacatactttactgtggtcactgata
tcaggaccttcacaacaacccaatgatttgggtacgacagttattctggatgggtcagat
atcaaaattacaccactaaaaatcgccaatacaccacctccaatggcatttagaacttgt
actattgataagaacgagacagttttgcatgctgccgtgaacaatactaatgatacactg
gctattttgacaaggtcgaggattcttattgctgaatggaatttgtctgcagaaggaaga
aaagtaaagactccacagattgtaaaagagattccattattagcagttctaccggatgat
acggttcccaagcagttagcatttattaacaacttggttgctattgtagtagatgaagtt
gtcggctcgacaatggtagtattagagctggtgaatgaaatcgatgagaacgacgagaca
cagctggagtattcagtggctgctgtgcacaatattgttccagatgtatttattttgaag
actcaatccgactacggtgcatttgtttttgagacggtcgatgccaaggttcatcggttg
tctccgtatgatttggaagtgattgaagctgatattgcccgattcccagagcgctgtatt
gcatttgaggttgacagtggagttagcgaggctattgaggttgagcaaaaggcagttgac
tatgaaaatgatgatattgaagcttcaggtccagttgctgtgtttgcaacacccactgct
tatggtctttctggcaagggtcgattatatgccaatcaaaaacagctttcaggatcagtt
acctcattgactatcagtgagagccatgtcatctttacaacggctcagcattatctcaaa
ttctgtcatttgagtgccgacgttgatgaaatcaccgttccatctgatgaagaccaacag
tcagatgagcgatgccggtcaattgaacgtggttctttaattgtttcggttattccatcc
aaaacagctctcattttgcaagctccacggggcaatttagagactattcatcctcgtatc
atggttttgagtgaggtccgtaggaacatcgacgctatccgttacgaccttgcattcaag
tcatgtcgagttcaccggatcgatctcaacttgcttcatgactattctcctcaaaccttt
tacgataatctcgatacatttgttgaccaactggctagtgtcgagtatatcgatttgttt
ctatcaggactcaaagaggcagatgtgtctcaaacaatgtacaaagagactatcactgag
ggaattgccaaactcaagcttgatgatcaagaagccgaaacagcagctccagttgtttct
ggtggtcccaatgccactggatccagtgctactggtgagtccaacaaagtcaaccgtatt
tgtgacgcattgatatcggtcttggatacgcctgatcgcagaactacatacttgcaaagc
atcctcacagcccacgcatgtaaatcaccacctgatcttgaggcggcattgcttcttgca
aaggaactattcccaagcaagaaacctaactccggctctgaagttaagtcttcaacaacc
aacttggccgaaacagctgttcagcacctatgtttcttacaagacgtcgaacttctttac
agaactgccctcggtctttatgaccttgaattgactcttttggttgcacaacagtctcaa
aaggatcctaaagaatacctgccattcttacaaaacatccagttacaaacaccattacga
ggtaaattccttattgatacacatctcaagcgctatgaaaaagccttgctgcacctttct
caactaggtgaagaagcatttgacgagttactggactacgttgttgaacaccagctatac
aagccagcgttatccatctacaaatacgacgcgggcaaacaagaccaaatcctcgaattg
tacgcttcattccttcaaggacaaaccaactactcagaagcagctctggcatatgaagca
cttggcaaattcgaagatgccgtagacgtgtatcaattatccggagactggagtgcagca
ttggctattttgagcgaacacaagtctctgtttaatgaagacaagctcattgagacggct
caacacctgggagaactggcctatgacgctcatcagtaccaagccgcagctacaatccag
ctcgactatcttaaagatataaaggaagcagcacgaatcctctgtaaaggacatttatac
gacgaagctatacgagtagtgacacttcataaccaccctgagtatctcgagttgattatt
gattctggtctgttagaaggattcggacagatctcggagcttgtgtctgattgtaaatca
caagtcaagtcacaagtcaaccgaatccgagaacttcgaactaaaaaagccgctgatcca
ctaggatttttcggcggtggccctgaagatgatacccctgataacgtatcaatcgcacct
accgagtcgtctacagcaccatcattcttcaccagatataccggtaagacagctggaacc
gcgcaaacaggagcatctcgacgaactgctaaaaacaaacgtcgtgaagaacggaagcga
gctcgtggtaagaagggcagtgtctatgaagaagagtatctcgtgaattccatgggtcga
ctgattgaccgacttcacgagacccaacctgaagccacccgactcattgaaggactgatc
cgacgcaaaatgcgcagtcacgcctaccaagtccaagccatgttcgtacaagtgctccaa
gacgtttccgacgtggtcgaagaaatattcaccctctcagaaaaagaccgcgaacgctac
gacgacgacggcaacgtctactacctcgaccctctcccactacccgtcatcaaaccgttc
cccaccaaacacatgctggacttctag

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