Sugiyamaella lignohabitans: AWJ20_755
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Entry
AWJ20_755 CDS
T05270
Symbol
SUB2
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
slb03015
mRNA surveillance pathway
slb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_755 (SUB2)
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_755 (SUB2)
03015 mRNA surveillance pathway
AWJ20_755 (SUB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_755 (SUB2)
03041 Spliceosome [BR:
slb03041
]
AWJ20_755 (SUB2)
Enzymes [BR:
slb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWJ20_755 (SUB2)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AWJ20_755 (SUB2)
Spliceosome [BR:
slb03041
]
Complex C
Other components
EJC/TREX
AWJ20_755 (SUB2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AWJ20_755 (SUB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
30037822
NCBI-ProteinID:
XP_018734976
UniProt:
A0A167D571
LinkDB
All DBs
Position
A:2382998..2383756
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AA seq
252 aa
AA seq
DB search
MNALVRDKHIRLGNVRTFVIDECDKVLEAVDMRRDVQEIFRSTPHQKQVMMFSATLSQEI
RPICKRFMQNPLEIYVDDETKLTLHGLQQYYVKLEEKEKNRKLNDLLDNLEFNQVIIFVK
STHRANELNKLLNECSFPSIAVHSGIPQEERILRYKSFKEFNKRICVSTDVFGRGIDIER
INLAINYDLPPEADQYLHRVGRAGRFGTKGLAVSFVSSEEDTKVLEKIQERFEVNIAPFP
EEGVDPSTYMNT
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcttgtcagagacaagcacattcgtttaggtaatgtcagaacttttgttatt
gatgagtgtgacaaggttttggaagctgttgatatgagacgtgatgtccaagaaatcttc
cgttccactccccaccaaaagcaggttatgatgttctcggccactctttcccaagagatt
cgtcctatctgtaagagattcatgcaaaatcctttggagatttacgtcgatgatgagacc
aagttgactcttcacggtttgcaacagtactatgtcaagcttgaagagaaggagaagaac
cgtaagctcaacgatttgctcgataacctcgagttcaaccaggttattatctttgtcaag
tcgacccaccgtgccaacgagctcaacaagttgcttaatgagtgtagtttccctagtatt
gctgtccacagtggtattcctcaagaagagcgtatcctccgttataagtcattcaaggag
ttcaacaagcgtatctgtgtctctaccgatgttttcggtcgtggtatcgatattgagcgt
attaacttggctatcaactacgaccttcctcctgaggctgatcagtacctccaccgtgtt
ggtcgtgctggtcgtttcggtaccaagggtctcgctgtttcatttgtttcttctgaagag
gatactaaggtccttgagaagattcaagagcgtttcgaggttaacattgctcctttccct
gaggagggtgttgatccttccacctacatgaacacctaa
DBGET
integrated database retrieval system
