Sugiyamaella lignohabitans: AWJ20_79
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Entry
AWJ20_79 CDS
T05270
Symbol
PUS4
Name
(RefSeq) pseudouridine synthase PUS4
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slb03016
]
AWJ20_79 (PUS4)
Enzymes [BR:
slb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AWJ20_79 (PUS4)
Transfer RNA biogenesis [BR:
slb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AWJ20_79 (PUS4)
Prokaryotic type
AWJ20_79 (PUS4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-GeneID:
30037860
NCBI-ProteinID:
XP_018734332
UniProt:
A0A167CLJ8
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Position
A:complement(264410..265621)
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AA seq
403 aa
AA seq
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MLWIKANLNFLRTVIETRKTVFIAAESRTVNALETTMNGVFAVNKPSGPTSHDIVHKIRD
LFNKSSLFEADIKKVTSQYKGGKKSRRQRLPPIKVGHGGTLDPLADGILVIGVGNGTKEL
PKYLGNCTKVYRATALLGTTTDTYDSEGKVVGRGKTDHITDEMVATALTKLRGDISQIPP
IYSALKMGGKKLYEYARSGQPLPREIEARNVTVHELELINGGLQWDHKFSAPAIESPEEE
RKISIEFEEKSLQSKGLAPPPELFYDGTIPENSKPSPILEIRFSVSSGTYIRTLIHDLGL
ALGCGAHMVTLTRLQQGNWKVGENAFELTDFTQHPDSYWGPPLQYYLHSGPGETLKNLFP
KEEPGPATQDQEENETKEDTALTNVKQKNPDHVQGTETENYKR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgctctggataaaagcgaatttgaattttttgaggaccgtgattgaaactcgaaaaacc
gtatttattgcagccgagtccaggacagtgaacgctctagaaactacaatgaacggtgtg
ttcgcagtgaacaagccatcgggccctacttcgcatgacattgtacataagatccgtgat
ctatttaacaaatcgtccttatttgaagccgatattaaaaaggttaccagccaatataag
ggaggcaagaagtcgcgtagacagcgactaccgcctataaaagtgggtcatggaggtact
ttagatccactggcagatggcattctagtaattggcgttggaaatggaacgaaagaatta
cctaaatatcttggcaattgtacgaaagtatatcgagcaactgccttactaggtactacc
acggatacctatgattcggaaggaaaagttgtgggtagaggaaagacagatcacattacc
gacgaaatggtcgcgactgcattaacaaagcttcgtggtgacatttctcagatccctcct
atttattcagccctgaagatgggcggcaagaaactctatgaatatgctcggtctggccag
ccattaccgcgagaaattgaggcccgcaatgtgactgtccacgaattagaacttataaac
ggtggattgcagtgggatcacaaattttctgctcctgctattgagagtccggaagaagaa
aggaaaatttcaatcgaatttgaagagaaatctctacagtcaaagggacttgctcctcca
ccagagctgttttacgatggaacgattcctgaaaactcaaaaccaagccctattcttgag
attagattcagtgtttcttcaggaacatatattaggacattgatccatgatcttggcttg
gcattaggatgtggtgcacacatggtgacactgacccgtctccaacaaggcaattggaaa
gtgggtgaaaacgcatttgaactgactgatttcacacaacaccctgactcctactgggga
ccacctttacaatattacttgcattctggacctggagaaactttaaaaaatctctttccc
aaagaagaacccgggcctgctacccaagatcaggaagaaaatgaaacgaaagaagacaca
gctctgacaaacgttaaacaaaaaaatccggatcatgtacagggaactgaaacggaaaac
tacaaacgataa
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